Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p18190 Brassica napus
Aa31LG1G12880 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.452 Anthoceros agrestis
Actinidia07200 Actinidia chinensis
Actinidia24166 Actinidia chinensis
Ah.01g016150 Amaranthus hybridus
AL6G33940 Arabidopsis lyrata
Aqoxy1G01005 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3CLD45 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.43PCVQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.76UAY3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9WR60Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9XN6EE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F907EV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G5FPRP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QN3LZL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RDY6U4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TP1LAH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W9NQ6G Arachis hypogaea
AT5G22830 Arabidopsis thaliana
ATR0665G031 Amborella trichopoda
Atru.chr3.3424 Acer truncatum
AUR62023974 Chenopodium quinoa
AUR62031772 Chenopodium quinoa
BcaB08g36405 Brassica carinata
BcaC04g19603 Brassica carinata
BolC9t58255H Brassica oleracea
BraA10t43894Z Brassica rapa
C09p53800 Brassica napus
CAN.G644.47 Capsicum annuum
CANSAT64G0117 Cannabis sativa
CANSAT64G0716 Cannabis sativa
CARHR190740 Cardamine hirsuta
Carub.0006s2055 Capsella rubella
Ca_01692_v3 Cicer arietinum L.
Ca_30938_v3 Cicer arietinum L.
Cc01_g10030 Coffea canephora
CDE06G0450 Ceratophyllum demersum
Cfa010112 Carpinus fangiana
Cfa027116 Carpinus fangiana
Ciclev10028468m.g Citrus clementina
CiPaw.14G105100 Carya illinoinensis
ClCG01G013990 Citrullus lanatus
COL.COLO4_19256 Corchorus olitorius
Cpa.g.sc2655.1 Carica papaya
Cpa.g.sc47.33 Carica papaya
Cre03.g168600 Chlamydomonas reinhardtii
Cre50.g761497 Chlamydomonas reinhardtii
CsaV3_1G014320 Cucumis sativus L.
CsaV3_4G022020 Cucumis sativus L.
CSS0041747 Camellia sinensis var. sinensis
DCAR_015491 Daucus carota
Dinv29402 Davidia involucrata
Duzib150G1233 Durio zibethinus
Duzib170G0418 Durio zibethinus
ECA233G3593 Erigeron canadensis
ECA238G0643 Erigeron canadensis
EL10Ac9g21044 Beta vulgaris
Eucgr.J00410 Eucalyptus grandis
FAN11G2949 Fragaria x ananassa
FAN16G1757 Fragaria x ananassa
FAN25G3300 Fragaria x ananassa
FvH4_3g30160 Fragaria vesca
Glyma.12G180000 Glycine max
Glyma.13G320800 Glycine max
Gohir.A09G086400 Gossypium hirsutum
Gohir.A13G223600 Gossypium hirsutum
Gohir.D09G086420 Gossypium hirsutum
Gohir.D13G228400 Gossypium hirsutum
Gorai.006G102800 Gossypium raimondii
Gorai.013G259100 Gossypium raimondii
GSVIVG01031426001 Vitis vinifera
HanXRQChr02g0055131 Helianthus annuus
HanXRQChr14g0451871 Helianthus annuus
Haze_23498 Corylus avellana
Haze_23499 Corylus avellana
Hma1.2p1_0864F.1_g230060 Hydrangea macrophylla
Hma1.2p1_1447F.1_g284000 Hydrangea macrophylla
HPP92_014216 Vanilla planifolia
HPP92_014217 Vanilla planifolia
HPP92_014222 Vanilla planifolia
HPP92_026475 Vanilla planifolia
Hund07725 Selenicereus undatus
Lalb_Chr22g0350511 Lupinus albus
Lj2A998T22 Lonicera japonica
Lj3g0024733 Lotus japonicus
Lsat_1_v5_gn_2_96860 Lactuca sativa
Lsat_1_v5_gn_6_42460 Lactuca sativa
Manes.04G011000 Manihot esculenta
Manes.11G155200 Manihot esculenta
Mapoly0034s0035 Marchantia polymorpha
MBI01_g19330_MAGBIO Magnolia biondii
MCO16G698 Micromonas commoda
MD03G1131000 Malus domestica
MD11G1153500 Malus domestica
Medtr2g084565 Medicago truncatula
MELO3C004840.2 Cucumis melo
Migut.N02528 Erythranthe guttata
Nitab4.5_0000442g0140 Nicotiana tabacum
Nn2g13932 Nelumbo nucifera
Oeu026994.1 Olea europaea
Oeu039852.1 Olea europaea
Oeu044764.1 Olea europaea
Os03g0684400 Oryza sativa ssp. japonica
Peaxi162Scf00150g00079 Petunia axillaris
PGR119G0112 Punica granatum
PGSC0003DMG401000463 Solanum tuberosum
Phvul.005G128800 Phaseolus vulgaris
Potri.009G151400 Populus trichocarpa
Pp3c25_90 Physcomitrium patens
Pp3c5_14300 Physcomitrium patens
PRCOL_00001328 Prasinoderma coloniale
Prupe.6G116100 Prunus persica
Psat5g253880 Pisum sativum
PSO063G3820 Papaver somniferum
PSO339G5122 Papaver somniferum
QL01p014158 Quercus lobata
QL02p079364 Quercus lobata
RcHm_v2.0_Chr5g0055951 Rosa chinensis
Rhsim13G0103500 Rhododendron simsii
Sabra09G0119900 Salix brachista
SalBow3G0456 Salvia bowleyana
Sc06g0008870 Simmondsia chinensis
Sed0014392 Sechium edule
SEGI_15590 Sequoiadendron giganteum
SGA_v2.0_scaffold466G52019 Striga asiatica
SMO114G0014 Selaginella moellendorffii
Solyc11g066660.3 Solanum lycopersicum
Sopen11g026390 Solanum pennellii
Sp6g22590 Schrenkiella parvula
TAR623G0584 Trochodendron aralioides
THA.LOC104799526 Tarenaya hassleriana
Thecc.09G294600 Theobroma cacao
Thhalv10013483m.g Eutrema salsugineum
TPR.G32384 Trifolium pratense
TWI31G0675 Tripterygium wilfordii
unitig_22.g6648 Utricularia gibba
vmacro03234 Vaccinium macrocarpon
VMungo1080G0291 Vigna mungo
Zm00001eb053210 Zea mays

User provided reference genes

Program Settings