Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p01880 Brassica napus
A10p24830 Brassica napus
Aa31LG3G14260 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3500 Anthoceros agrestis
Actinidia22108 Actinidia chinensis
Actinidia22109 Actinidia chinensis
Actinidia30577 Actinidia chinensis
Ah.03g135500 Amaranthus hybridus
AL6G24010 Arabidopsis lyrata
Aqoxy5G03055 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.H63XD7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N4LA1V Arachis hypogaea
AT5G13390 Arabidopsis thaliana
ATR0582G070 Amborella trichopoda
Atru.chr12.1443 Acer truncatum
AUR62005722 Chenopodium quinoa
AUR62028835 Chenopodium quinoa
BcaC04g19119 Brassica carinata
BcaNung01159 Brassica carinata
BcaNung01880 Brassica carinata
BolC2t06551H Brassica oleracea
BolC9t59209H Brassica oleracea
BraA02t05161Z Brassica rapa
BraA10t44547Z Brassica rapa
C02p06100 Brassica napus
C09p63680 Brassica napus
CANSAT01G1825 Cannabis sativa
CARHR200040 Cardamine hirsuta
Carub.0006s1155 Capsella rubella
Ca_04087_v3 Cicer arietinum L.
CBR_g38877 Chara braunii
Cc11_g14910 Coffea canephora
CDE05G0204 Ceratophyllum demersum
CDE05G1761 Ceratophyllum demersum
Cfa009459 Carpinus fangiana
Ciclev10004203m.g Citrus clementina
CiPaw.06G110300 Carya illinoinensis
ClCG07G012020 Citrullus lanatus
COL.COLO4_08434 Corchorus olitorius
Cpa.g.sc38.68 Carica papaya
Cre01.g018050 Chlamydomonas reinhardtii
CsaV3_4G002140 Cucumis sativus L.
CSS0020507 Camellia sinensis var. sinensis
CSS0027672 Camellia sinensis var. sinensis
DCAR_026440 Daucus carota
DCAR_026441 Daucus carota
DCAR_029048 Daucus carota
Dinv17529 Davidia involucrata
Duzib052G0599 Durio zibethinus
Duzib248G1306 Durio zibethinus
ECA246G4063 Erigeron canadensis
EL10Ac2g02397 Beta vulgaris
Eucgr.G01983 Eucalyptus grandis
FAN07G1779 Fragaria x ananassa
FAN12G1583 Fragaria x ananassa
FAN17G2071 Fragaria x ananassa
FvH4_4g22440 Fragaria vesca
Glyma.08G363300 Glycine max
Glyma.18G298700 Glycine max
Gohir.A01G020200 Gossypium hirsutum
Gohir.D01G018800 Gossypium hirsutum
Gorai.002G021000 Gossypium raimondii
GSVIVG01001111001 Vitis vinifera
HanXRQChr06g0175451 Helianthus annuus
HanXRQChr17g0540341 Helianthus annuus
Haze_12514 Corylus avellana
Hma1.2p1_1494F.1_g286880 Hydrangea macrophylla
Hma1.2p1_1494F.1_g286890 Hydrangea macrophylla
HPP92_020112 Vanilla planifolia
Lalb_Chr10g0091131 Lupinus albus
Lj1g0002578 Lotus japonicus
Lj2g0025677 Lotus japonicus
Lj6C839G5 Lonicera japonica
Lj6C839G6 Lonicera japonica
Lsat_1_v5_gn_3_32540 Lactuca sativa
Manes.08G100200 Manihot esculenta
Mapoly0029s0137 Marchantia polymorpha
MBI11_g02503_MAGBIO Magnolia biondii
MCO16G196 Micromonas commoda
MD13G1132200 Malus domestica
MD16G1142500 Malus domestica
Medtr7g006760 Medicago truncatula
Medtr7g406760 Medicago truncatula
MELO3C017824.2 Cucumis melo
Migut.K01044 Erythranthe guttata
MSTRG.445 Avicennia marina
MSTRG.8060 Avicennia marina
Nitab4.5_0002569g0090 Nicotiana tabacum
Nn3g16247 Nelumbo nucifera
Nn4g22102 Nelumbo nucifera
Oeu011729.2 Olea europaea
Os11g0528200 Oryza sativa ssp. japonica
Peaxi162Scf00842g00430 Petunia axillaris
PGR119G2201 Punica granatum
Phvul.008G003900 Phaseolus vulgaris
Potri.001G068900 Populus trichocarpa
Potri.003G161400 Populus trichocarpa
Pp3c14_23090 Physcomitrium patens
Pp3c1_41760 Physcomitrium patens
Prupe.1G213300 Prunus persica
Psat3g206760 Pisum sativum
PSO017G1761 Papaver somniferum
PSO478G1749 Papaver somniferum
QL03p048748 Quercus lobata
RcHm_v2.0_Chr0c29g0501111 Rosa chinensis
RcHm_v2.0_Chr2g0126951 Rosa chinensis
RcHm_v2.0_Chr2g0133761 Rosa chinensis
RcHm_v2.0_Chr4g0402251 Rosa chinensis
RcHm_v2.0_Chr4g0428701 Rosa chinensis
RcHm_v2.0_Chr5g0056851 Rosa chinensis
RcHm_v2.0_Chr6g0278911 Rosa chinensis
RcHm_v2.0_Chr7g0226991 Rosa chinensis
Rhsim12G0016200 Rhododendron simsii
Sabra01G0048200 Salix brachista
Sabra03G0117300 Salix brachista
SalBow2G2141 Salvia bowleyana
Sc11g0000050 Simmondsia chinensis
Sed0017746 Sechium edule
Sed0020947 Sechium edule
SEGI_02355 Sequoiadendron giganteum
SEGI_17725 Sequoiadendron giganteum
SGA_v2.0_scaffold258G45771 Striga asiatica
SGA_v2.0_scaffold98G29280 Striga asiatica
SMO116G0229 Selaginella moellendorffii
Solyc11g033282.1 Solanum lycopersicum
Sopen11g017110 Solanum pennellii
Sp6g30630 Schrenkiella parvula
TAR374G0614 Trochodendron aralioides
TAR622G1101 Trochodendron aralioides
THA.LOC104825454 Tarenaya hassleriana
Thecc.02G190700 Theobroma cacao
Thhalv10012499m.g Eutrema salsugineum
TPR.G9702 Trifolium pratense
TWI18G1022 Tripterygium wilfordii
TWI36G1286 Tripterygium wilfordii
unitig_22.g6372 Utricularia gibba
unitig_22.g6373 Utricularia gibba
vmacro01010 Vaccinium macrocarpon
VMungo1383G1684 Vigna mungo
Zm00001eb113290 Zea mays

User provided reference genes

Program Settings