Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p32390 Brassica napus
Aa31LG3G16620 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.475 Anthoceros agrestis
Actinidia24562 Actinidia chinensis
Ah.03g139850 Amaranthus hybridus
AL8G43140 Arabidopsis lyrata
Aqoxy5G01366 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.52LQAS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HVQN9F Arachis hypogaea
AT5G65540 Arabidopsis thaliana
ATR0767G001 Amborella trichopoda
ATR0767G089 Amborella trichopoda
Atru.chr3.678 Acer truncatum
Atru.chr3.724 Acer truncatum
AUR62017985 Chenopodium quinoa
BcaB04g20020 Brassica carinata
BcaC01g02786 Brassica carinata
BcaC01g02797 Brassica carinata
BolC3t18285H Brassica oleracea
BolC3t18305H Brassica oleracea
BraA06t26164Z Brassica rapa
C03p60240 Brassica napus
C03p60440 Brassica napus
CAN.G581.10 Capsicum annuum
CANSAT01G3178 Cannabis sativa
CARHR279520 Cardamine hirsuta
Carub.0008s2640 Capsella rubella
Ca_25228_v3 Cicer arietinum L.
Cc07_g13970 Coffea canephora
CDE04G1142 Ceratophyllum demersum
CDE07G0659 Ceratophyllum demersum
CDE07G1566 Ceratophyllum demersum
CDE07G1819 Ceratophyllum demersum
CDE07G2034 Ceratophyllum demersum
Cfa006872 Carpinus fangiana
Ciclev10025202m.g Citrus clementina
CiPaw.01G172300 Carya illinoinensis
CiPaw.03G215800 Carya illinoinensis
CiPaw.07G046300 Carya illinoinensis
CiPaw.08G141000 Carya illinoinensis
CiPaw.10G105100 Carya illinoinensis
ClCG01G018310 Citrullus lanatus
COL.COLO4_27370 Corchorus olitorius
Cpa.g.sc55.13 Carica papaya
CsaV3_6G044940 Cucumis sativus L.
CSS0020800 Camellia sinensis var. sinensis
CSS0030560 Camellia sinensis var. sinensis
DCAR_003442 Daucus carota
Dinv13587 Davidia involucrata
Dinv36943 Davidia involucrata
Duzib264G1263 Durio zibethinus
ECA246G0291 Erigeron canadensis
ECA246G4867 Erigeron canadensis
EL10Ac6g15187 Beta vulgaris
Eucgr.H02447 Eucalyptus grandis
FAN19G3176 Fragaria x ananassa
FAN23G0007 Fragaria x ananassa
FAN26G3253 Fragaria x ananassa
FAN28G0477 Fragaria x ananassa
FvH4_1g19490 Fragaria vesca
Glyma.01G021600 Glycine max
Glyma.09G200000 Glycine max
Glyma.11G112400 Glycine max
Gohir.A12G084900 Gossypium hirsutum
Gohir.D12G079700 Gossypium hirsutum
Gorai.008G093000 Gossypium raimondii
GSVIVG01002523001 Vitis vinifera
GSVIVG01002660001 Vitis vinifera
HanXRQChr04g0112001 Helianthus annuus
HanXRQChr12g0368991 Helianthus annuus
Haze_03887 Corylus avellana
Haze_03890 Corylus avellana
Hma1.2p1_0369F.1_g137390 Hydrangea macrophylla
Hma1.2p1_0369F.1_g137400 Hydrangea macrophylla
HPP92_017563 Vanilla planifolia
Hund16521 Selenicereus undatus
Lalb_Chr16g0381591 Lupinus albus
Lj2A532G30 Lonicera japonica
Lj2g0006088 Lotus japonicus
Lsat_1_v5_gn_3_62981 Lactuca sativa
Manes.12G125300 Manihot esculenta
Mapoly0105s0033 Marchantia polymorpha
MBI16_g31257_MAGBIO Magnolia biondii
MCO11G800 Micromonas commoda
MD01G1040900 Malus domestica
MD15G1310400 Malus domestica
Medtr5g031750 Medicago truncatula
MELO3C007709.2 Cucumis melo
Migut.H02285 Erythranthe guttata
MSTRG.23386 Avicennia marina
Nitab4.5_0000128g0050 Nicotiana tabacum
Nitab4.5_0007769g0050 Nicotiana tabacum
Nn1g05603 Nelumbo nucifera
Oeu017109.1 Olea europaea
Oeu017110.1 Olea europaea
Oeu042113.2 Olea europaea
Os03g0802300 Oryza sativa ssp. japonica
Peaxi162Scf01142g00001 Petunia axillaris
PGR102G1704 Punica granatum
PGSC0003DMG400014586 Solanum tuberosum
Phvul.002G145800 Phaseolus vulgaris
Potri.007G011800 Populus trichocarpa
Pp3c20_16050 Physcomitrium patens
Prupe.6G203300 Prunus persica
Psat3g169840 Pisum sativum
PSO170G0154 Papaver somniferum
PSO210G6830 Papaver somniferum
QL06p035944 Quercus lobata
RcHm_v2.0_Chr2g0110871 Rosa chinensis
RcHm_v2.0_Chr2g0110941 Rosa chinensis
Rhsim08G0017200 Rhododendron simsii
Sabra07G0009200 Salix brachista
Sabra15G0071300 Salix brachista
Sabra15G0079600 Salix brachista
SalBow3G1020 Salvia bowleyana
Sc03g0000430 Simmondsia chinensis
Sed0012268 Sechium edule
SGA_v2.0_scaffold108G30927 Striga asiatica
SMO203G0252 Selaginella moellendorffii
Solyc01g056590.2 Solanum lycopersicum
Solyc02g062813.1 Solanum lycopersicum
Solyc02g062815.1 Solanum lycopersicum
Solyc05g051370.3 Solanum lycopersicum
Solyc11g016980.3 Solanum lycopersicum
Sopen05g029760 Solanum pennellii
Sp2g28640 Schrenkiella parvula
TAR375G0200 Trochodendron aralioides
TAR381G1343 Trochodendron aralioides
TAR625G0934 Trochodendron aralioides
THA.LOC104798625 Tarenaya hassleriana
Thecc.01G089100 Theobroma cacao
Thhalv10003865m.g Eutrema salsugineum
TPR.G36831 Trifolium pratense
TPR.G7258 Trifolium pratense
TWI74G1080 Tripterygium wilfordii
TWI77G0993 Tripterygium wilfordii
unitig_736.g22591 Utricularia gibba
vmacro18548 Vaccinium macrocarpon
VMungo1215G0139 Vigna mungo
Zm00001eb061260 Zea mays

User provided reference genes

Program Settings