Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p38260 Brassica napus
A09p04910 Brassica napus
Aa31LG11G8350 Aethionema arabicum
Actinidia05775 Actinidia chinensis
Ah.06g192270 Amaranthus hybridus
AL468U10010 Arabidopsis lyrata
AL8G23370 Arabidopsis lyrata
Aqoxy1G01374 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1SX7LU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9C3ED3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A0PUBP Arachis hypogaea
AT5G49570 Arabidopsis thaliana
ATR0763G186 Amborella trichopoda
Atru.chr2.800 Acer truncatum
AUR62001022 Chenopodium quinoa
AUR62004929 Chenopodium quinoa
BolC7t44530H Brassica oleracea
BolC9t53455H Brassica oleracea
BraA06t26741Z Brassica rapa
BraA09t36128Z Brassica rapa
BraA09t36129Z Brassica rapa
C07p39970 Brassica napus
CAN.G134.108 Capsicum annuum
CANSAT54G0735 Cannabis sativa
CARHR287990 Cardamine hirsuta
Carub.0008s0944 Capsella rubella
Ca_09415_v3 Cicer arietinum L.
CBR_g7957 Chara braunii
Cc02_g31940 Coffea canephora
Cc02_g31990 Coffea canephora
CDE11G0281 Ceratophyllum demersum
CDE11G1080 Ceratophyllum demersum
Cfa006446 Carpinus fangiana
Cfa027061 Carpinus fangiana
Ciclev10000348m.g Citrus clementina
CiPaw.07G065500 Carya illinoinensis
ClCG02G016550 Citrullus lanatus
COL.COLO4_15310 Corchorus olitorius
Cpa.g.sc117.79 Carica papaya
Cpa.g.sc117.80 Carica papaya
Cre01.g053900 Chlamydomonas reinhardtii
CsaV3_2G004220 Cucumis sativus L.
CSS0018477 Camellia sinensis var. sinensis
CSS0025893 Camellia sinensis var. sinensis
CSS0032146 Camellia sinensis var. sinensis
CSS0033581 Camellia sinensis var. sinensis
CSS0047105 Camellia sinensis var. sinensis
DCAR_029737 Daucus carota
Dinv20863 Davidia involucrata
Duzib177G1118 Durio zibethinus
ECA232G3664 Erigeron canadensis
EL10Ac4g09118 Beta vulgaris
Eucgr.H04377 Eucalyptus grandis
Eucgr.H04378 Eucalyptus grandis
Eucgr.H04379 Eucalyptus grandis
Eucgr.L03382 Eucalyptus grandis
FAN05G1441 Fragaria x ananassa
FAN05G3323 Fragaria x ananassa
FAN09G3553 Fragaria x ananassa
FAN14G5841 Fragaria x ananassa
FvH4_6g03130 Fragaria vesca
Glyma.03G246500 Glycine max
Glyma.16G136532 Glycine max
Glyma.19G243900 Glycine max
Gohir.A11G253600 Gossypium hirsutum
Gohir.D11G263066 Gossypium hirsutum
Gohir.D11G263500 Gossypium hirsutum
Gorai.007G282800 Gossypium raimondii
Gorai.007G283500 Gossypium raimondii
GSVIVG01021825001 Vitis vinifera
HanXRQChr09g0254821 Helianthus annuus
Haze_04347 Corylus avellana
Hma1.2p1_0083F.1_g042810 Hydrangea macrophylla
Hma1.2p1_0083F.1_g042820 Hydrangea macrophylla
Hund22122 Selenicereus undatus
Lalb_Chr15g0076821 Lupinus albus
Lj1g0002084 Lotus japonicus
Lj7A489G24 Lonicera japonica
Lsat_1_v5_gn_4_140660 Lactuca sativa
Manes.08G133100 Manihot esculenta
Mapoly0021s0092 Marchantia polymorpha
MCO12G063 Micromonas commoda
MD12G1238800 Malus domestica
Medtr7g114940 Medicago truncatula
MELO3C004372.2 Cucumis melo
Migut.N01906 Erythranthe guttata
Nitab4.5_0004469g0060 Nicotiana tabacum
Nitab4.5_0005582g0050 Nicotiana tabacum
Nitab4.5_0005582g0060 Nicotiana tabacum
Nn7g38390 Nelumbo nucifera
Oeu040763.1 Olea europaea
Os07g0497400 Oryza sativa ssp. japonica
Peaxi162Scf00282g00225 Petunia axillaris
PGR004G2522 Punica granatum
PGSC0003DMG400019450 Solanum tuberosum
Phvul.006G100800 Phaseolus vulgaris
Potri.013G039600 Populus trichocarpa
Pp3c4_6120 Physcomitrium patens
PRCOL_00003670 Prasinoderma coloniale
Prupe.6G341700 Prunus persica
Prupe.6G342000 Prunus persica
Psat3g007760 Pisum sativum
PSO541G1403 Papaver somniferum
PSO675G4284 Papaver somniferum
QL03p025023 Quercus lobata
RcHm_v2.0_Chr3g0451381 Rosa chinensis
Rhsim07G0075700 Rhododendron simsii
Sabra13G0037000 Salix brachista
SalBow4G0205 Salvia bowleyana
SalBow4G0458 Salvia bowleyana
Sc09g0003880 Simmondsia chinensis
Sed0025675 Sechium edule
SEGI_17604 Sequoiadendron giganteum
SGA_v2.0_scaffold81G26086 Striga asiatica
SHI18393 Sapria himalayana
SMO343G0028 Selaginella moellendorffii
SMO367G0055 Selaginella moellendorffii
SMO367G0213 Selaginella moellendorffii
SMO367G0934 Selaginella moellendorffii
SMO367G1212 Selaginella moellendorffii
Solyc01g097440.3 Solanum lycopersicum
Sopen01g041110 Solanum pennellii
Sp2g19870 Schrenkiella parvula
TAR624G0703 Trochodendron aralioides
TAR624G0794 Trochodendron aralioides
TAR624G0835 Trochodendron aralioides
TAR624G0950 Trochodendron aralioides
TAR624G1307 Trochodendron aralioides
THA.LOC104818635 Tarenaya hassleriana
Thecc.05G286400 Theobroma cacao
Thhalv10003714m.g Eutrema salsugineum
TPR.G7013 Trifolium pratense
TWI74G0680 Tripterygium wilfordii
unitig_21.g20055 Utricularia gibba
vmacro13830 Vaccinium macrocarpon
vmacro23344 Vaccinium macrocarpon
VMungo0251G2379 Vigna mungo
VMungo0540G0884 Vigna mungo
VMungo1383G0330 Vigna mungo
Zm00001eb105420 Zea mays

User provided reference genes

Program Settings