Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p41110 Brassica napus
A09p03440 Brassica napus
Aa31LG2G5140 Aethionema arabicum
Aa31sc17G60 Aethionema arabicum
Actinidia05981 Actinidia chinensis
Actinidia18441 Actinidia chinensis
Actinidia35779 Actinidia chinensis
Actinidia36124 Actinidia chinensis
Ah.02g128220 Amaranthus hybridus
AL5G16940 Arabidopsis lyrata
Aqoxy1G02464 Aquilegia oxysepala
Aqoxy5G03740 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.47572L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WAXE9D Arachis hypogaea
AT3G27520 Arabidopsis thaliana
ATR0824G160 Amborella trichopoda
Atru.chr6.2431 Acer truncatum
AUR62028419 Chenopodium quinoa
AUR62041940 Chenopodium quinoa
BcaB04g19441 Brassica carinata
BcaC04g23900 Brassica carinata
BcaC06g30982 Brassica carinata
BcaC06g33809 Brassica carinata
BolC7t44179H Brassica oleracea
BolC9t53284H Brassica oleracea
BraA06t27034Z Brassica rapa
BraA09t35982Z Brassica rapa
C07p36630 Brassica napus
C09p03650 Brassica napus
CANSAT64G0255 Cannabis sativa
CARHR148890 Cardamine hirsuta
Carub.0005s0595 Capsella rubella
Ca_04142_v3 Cicer arietinum L.
Cc07_g01510 Coffea canephora
CDE02G4674 Ceratophyllum demersum
CDE09G0806 Ceratophyllum demersum
Cfa007338 Carpinus fangiana
Ciclev10016916m.g Citrus clementina
CiPaw.03G045600 Carya illinoinensis
CiPaw.04G029700 Carya illinoinensis
ClCG10G013780 Citrullus lanatus
COL.COLO4_30424 Corchorus olitorius
Cpa.g.sc108.77 Carica papaya
CsaV3_3G042880 Cucumis sativus L.
CSS0007505 Camellia sinensis var. sinensis
DCAR_011260 Daucus carota
Dinv25725 Davidia involucrata
Dinv33426 Davidia involucrata
Duzib160G0719 Durio zibethinus
Duzib192G0894 Durio zibethinus
Duzib235G1061 Durio zibethinus
ECA238G3024 Erigeron canadensis
EL10Ac6g14100 Beta vulgaris
Eucgr.I01730 Eucalyptus grandis
FAN02G1690 Fragaria x ananassa
FAN05G2721 Fragaria x ananassa
FAN09G1593 Fragaria x ananassa
FAN14G4849 Fragaria x ananassa
FvH4_6g51790 Fragaria vesca
Glyma.05G002400 Glycine max
Glyma.19G002600 Glycine max
Gohir.A05G131401 Gossypium hirsutum
Gohir.A09G082300 Gossypium hirsutum
Gohir.D05G130900 Gossypium hirsutum
Gohir.D09G082100 Gossypium hirsutum
Gorai.006G097900 Gossypium raimondii
Gorai.009G134600 Gossypium raimondii
GSVIVG01032384001 Vitis vinifera
HanXRQChr07g0199031 Helianthus annuus
HanXRQChr14g0451171 Helianthus annuus
Haze_14759 Corylus avellana
Hma1.2p1_0818F.1_g223270 Hydrangea macrophylla
HPP92_006182 Vanilla planifolia
Hund15527 Selenicereus undatus
Lalb_Chr22g0360721 Lupinus albus
Lalb_Chr24g0403571 Lupinus albus
Lj2g0025845 Lotus japonicus
Lju41C43G9 Lonicera japonica
Lsat_1_v5_gn_0_18280 Lactuca sativa
Lsat_1_v5_gn_2_91160 Lactuca sativa
Manes.17G111100 Manihot esculenta
Mapoly0108s0043 Marchantia polymorpha
MBI07_g39476_MAGBIO Magnolia biondii
MBI10_g11211_MAGBIO Magnolia biondii
MBI14_g36718_MAGBIO Magnolia biondii
MD09G1022900 Malus domestica
MD17G1022200 Malus domestica
Medtr6g004420 Medicago truncatula
MELO3C026588.2 Cucumis melo
Migut.K01412 Erythranthe guttata
MSTRG.15534 Avicennia marina
MSTRG.3284 Avicennia marina
Nitab4.5_0005593g0050 Nicotiana tabacum
Nn3g16214 Nelumbo nucifera
Nn3g16686 Nelumbo nucifera
Oeu018990.1 Olea europaea
Oeu033728.1 Olea europaea
Oeu048609.1 Olea europaea
Os02g0595300 Oryza sativa ssp. japonica
Peaxi162Scf00700g00430 Petunia axillaris
PGR142G0633 Punica granatum
PGSC0003DMG400012636 Solanum tuberosum
Phvul.004G004600 Phaseolus vulgaris
Potri.001G343200 Populus trichocarpa
Prupe.3G293900 Prunus persica
Psat1g053440 Pisum sativum
PSO017G4510 Papaver somniferum
PSO063G0871 Papaver somniferum
PSO478G1356 Papaver somniferum
PSO754G0087 Papaver somniferum
QL02p074001 Quercus lobata
RcHm_v2.0_Chr2g0173291 Rosa chinensis
Rhsim10G0014600 Rhododendron simsii
Sabra16G0222600 Salix brachista
Sc07g0003180 Simmondsia chinensis
Sed0020492 Sechium edule
Sed0022021 Sechium edule
SEGI_00200 Sequoiadendron giganteum
SGA_v2.0_scaffold30G12408 Striga asiatica
SGA_v2.0_scaffold47G17517 Striga asiatica
SHI03806 Sapria himalayana
SMO356G0664 Selaginella moellendorffii
Solyc02g093450.3 Solanum lycopersicum
Sopen02g038220 Solanum pennellii
Sp2g16690 Schrenkiella parvula
TAR371G0105 Trochodendron aralioides
TAR629G3442 Trochodendron aralioides
THA.LOC104825211 Tarenaya hassleriana
THA.LOC104825319 Tarenaya hassleriana
Thecc.06G091700 Theobroma cacao
Thhalv10004961m.g Eutrema salsugineum
Thhalv10027961m.g Eutrema salsugineum
TPR.G31952 Trifolium pratense
TWI12G0237 Tripterygium wilfordii
TWI36G1604 Tripterygium wilfordii
TWI56G0849 Tripterygium wilfordii
vmacro05877 Vaccinium macrocarpon
vmacro18294 Vaccinium macrocarpon
VMungo0331G1437 Vigna mungo
VMungo0464G1533 Vigna mungo

User provided reference genes

Program Settings