Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p11900 Brassica napus
A03p52320 Brassica napus
A08p14650 Brassica napus
Aa31LG6G2560 Aethionema arabicum
Aa31LG9G8470 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2068 Anthoceros agrestis
Ah.15g091860 Amaranthus hybridus
AL7G33670 Arabidopsis lyrata
Aqoxy1G01389 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3VSL80 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z3SLP7 Arachis hypogaea
AT4G20150 Arabidopsis thaliana
ATR0763G104 Amborella trichopoda
Atru.chr10.245 Acer truncatum
AUR62040995 Chenopodium quinoa
AUR62042809 Chenopodium quinoa
BcaB03g11659 Brassica carinata
BcaC01g00657 Brassica carinata
BcaC06g30645 Brassica carinata
BcaNung03492 Brassica carinata
BcaNung03709 Brassica carinata
BolC3t20562H Brassica oleracea
BolC7t45576H Brassica oleracea
BraA01t01132Z Brassica rapa
BraA03t14308Z Brassica rapa
BraA08t33453Z Brassica rapa
C03p82800 Brassica napus
C07p50750 Brassica napus
CAN.G105.21 Capsicum annuum
CANSAT35G0922 Cannabis sativa
CARHR226980 Cardamine hirsuta
Carub.0007s2098 Capsella rubella
Ca_18217_v3 Cicer arietinum L.
CBR_g39209 Chara braunii
Cc09_g04680 Coffea canephora
CDE12G0557 Ceratophyllum demersum
Cfa001157 Carpinus fangiana
Ciclev10017510m.g Citrus clementina
CiPaw.06G130100 Carya illinoinensis
CiPaw.09G140100 Carya illinoinensis
CiPaw.10G107900 Carya illinoinensis
ClCG01G025920 Citrullus lanatus
COL.COLO4_25033 Corchorus olitorius
Cpa.g.sc2054.1 Carica papaya
CsaV3_6G053130 Cucumis sativus L.
CSS0024293 Camellia sinensis var. sinensis
DCAR_001258 Daucus carota
DCAR_001260 Daucus carota
DCAR_004357 Daucus carota
DCAR_016635 Daucus carota
DCAR_016636 Daucus carota
Dinv01135 Davidia involucrata
Dinv17881 Davidia involucrata
Duzib132G0617 Durio zibethinus
ECA238G4156 Erigeron canadensis
EL10Ac7g17253 Beta vulgaris
Eucgr.E04324 Eucalyptus grandis
FAN11G1325 Fragaria x ananassa
FAN16G3377 Fragaria x ananassa
FAN21G3865 Fragaria x ananassa
FAN25G0727 Fragaria x ananassa
FvH4_3g13280 Fragaria vesca
Glyma.05G134900 Glycine max
Glyma.08G090100 Glycine max
Gohir.A12G050600 Gossypium hirsutum
Gohir.A12G050700 Gossypium hirsutum
Gohir.D12G048900 Gossypium hirsutum
Gohir.D12G049000 Gossypium hirsutum
Gorai.008G051800 Gossypium raimondii
Gorai.008G051900 Gossypium raimondii
GSVIVG01010076001 Vitis vinifera
GSVIVG01010508001 Vitis vinifera
HanXRQChr09g0257861 Helianthus annuus
HanXRQChr14g0439061 Helianthus annuus
Haze_05194 Corylus avellana
HPP92_026455 Vanilla planifolia
Hund08547 Selenicereus undatus
Lalb_Chr07g0188141 Lupinus albus
Lalb_Chr07g0188151 Lupinus albus
Lalb_Chr13g0293041 Lupinus albus
Lj4g0025411 Lotus japonicus
Lsat_1_v5_gn_2_59701 Lactuca sativa
Manes.03G072100 Manihot esculenta
Mapoly0053s0096 Marchantia polymorpha
MBI15_g35018_MAGBIO Magnolia biondii
MBI15_g47666_MAGBIO Magnolia biondii
MBI18_g18219_MAGBIO Magnolia biondii
MBI18_g21701_MAGBIO Magnolia biondii
MBI18_g35539_MAGBIO Magnolia biondii
MCO10G264 Micromonas commoda
MD05G1243500 Malus domestica
MD10G1225400 Malus domestica
Medtr4g094792 Medicago truncatula
MELO3C006999.2 Cucumis melo
Migut.M02030 Erythranthe guttata
MSTRG.16378 Avicennia marina
Nitab4.5_0000217g0090 Nicotiana tabacum
Nitab4.5_0001299g0020 Nicotiana tabacum
Nitab4.5_0004786g0020 Nicotiana tabacum
Nn7g38416 Nelumbo nucifera
Oeu005613.1 Olea europaea
Oeu039133.1 Olea europaea
Oeu046914.1 Olea europaea
Os07g0498300 Oryza sativa ssp. japonica
Peaxi162Scf00203g01320 Petunia axillaris
Peaxi162Scf00700g00728 Petunia axillaris
PGR042G1348 Punica granatum
PGSC0003DMG400011262 Solanum tuberosum
Phvul.002G187200 Phaseolus vulgaris
Potri.001G074901 Populus trichocarpa
Potri.003G156301 Populus trichocarpa
Pp3c14_13800 Physcomitrium patens
Pp3c1_24730 Physcomitrium patens
Prupe.4G120200 Prunus persica
Psat7g087320 Pisum sativum
PSO675G4749 Papaver somniferum
PSO675G9273 Papaver somniferum
QL11p010970 Quercus lobata
RcHm_v2.0_Chr5g0021751 Rosa chinensis
Sabra01G0054000 Salix brachista
Sabra03G0113300 Salix brachista
Sc24g0002840 Simmondsia chinensis
Sed0007385 Sechium edule
SHI16868 Sapria himalayana
SMO134G0137 Selaginella moellendorffii
Solyc10g005230.3 Solanum lycopersicum
Sopen10g001220 Solanum pennellii
Sp7g18580 Schrenkiella parvula
TAR624G0209 Trochodendron aralioides
THA.LOC104811905 Tarenaya hassleriana
THA.LOC104812922 Tarenaya hassleriana
Thecc.02G001600 Theobroma cacao
Thhalv10026700m.g Eutrema salsugineum
TPR.G27391 Trifolium pratense
TWI15G0858 Tripterygium wilfordii
TWI38G0021 Tripterygium wilfordii
unitig_748.g7487 Utricularia gibba
vmacro03568 Vaccinium macrocarpon
Zm00001eb105410 Zea mays
Zm00001eb321910 Zea mays

User provided reference genes

Program Settings