Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p19890 Brassica napus
A09p41740 Brassica napus
Aa31LG7G6980 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2697 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.5342 Anthoceros agrestis
Actinidia31990 Actinidia chinensis
Actinidia33629 Actinidia chinensis
Ah.03g138500 Amaranthus hybridus
AL1G36530 Arabidopsis lyrata
AL1G36540 Arabidopsis lyrata
AL2G30760 Arabidopsis lyrata
Aqoxy5G03875 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.45PR62 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GULV0C Arachis hypogaea
AT1G22970 Arabidopsis thaliana
AT1G22980 Arabidopsis thaliana
AT1G71150 Arabidopsis thaliana
ATR0691G101 Amborella trichopoda
Atru.chr11.335 Acer truncatum
Atru.chr11.342 Acer truncatum
AUR62002772 Chenopodium quinoa
AUR62037258 Chenopodium quinoa
BcaB03g14874 Brassica carinata
BcaB07g32295 Brassica carinata
BcaC05g26209 Brassica carinata
BcaC08g46554 Brassica carinata
BolC5t30918H Brassica oleracea
BolC6t39580H Brassica oleracea
BraA07t31315Z Brassica rapa
BraA09t39663Z Brassica rapa
C05p22180 Brassica napus
C06p45250 Brassica napus
CAN.G1489.13 Capsicum annuum
CAN.G572.16 Capsicum annuum
CANSAT01G2653 Cannabis sativa
CARHR023350 Cardamine hirsuta
CARHR064450 Cardamine hirsuta
Carub.0001s2247 Capsella rubella
Carub.0002s1804 Capsella rubella
Ca_23703_v3 Cicer arietinum L.
Ca_30210_v3 Cicer arietinum L.
Cc11_g09260 Coffea canephora
CDE07G0910 Ceratophyllum demersum
Ciclev10015542m.g Citrus clementina
CiPaw.05G245400 Carya illinoinensis
ClCG05G022330 Citrullus lanatus
COL.COLO4_20121 Corchorus olitorius
Cpa.g.sc65.93 Carica papaya
CsaV3_5G034770 Cucumis sativus L.
CSS0031478 Camellia sinensis var. sinensis
DCAR_023622 Daucus carota
Dinv04903 Davidia involucrata
Dinv16166 Davidia involucrata
Duzib251G0055 Durio zibethinus
Duzib268G1740 Durio zibethinus
ECA246G4292 Erigeron canadensis
EL10Ac6g14276 Beta vulgaris
Eucgr.K00649 Eucalyptus grandis
FAN07G2597 Fragaria x ananassa
FAN12G0751 Fragaria x ananassa
FAN12G1468 Fragaria x ananassa
FAN17G2750 Fragaria x ananassa
FAN22G1873 Fragaria x ananassa
FvH4_4g26380 Fragaria vesca
Glyma.10G267900 Glycine max
Glyma.20G123200 Glycine max
Gohir.A05G317600 Gossypium hirsutum
Gohir.D05G319500 Gossypium hirsutum
Gorai.009G342800 Gossypium raimondii
GSVIVG01011804001 Vitis vinifera
HanXRQChr15g0477691 Helianthus annuus
HanXRQChr15g0477701 Helianthus annuus
HanXRQChr16g0524281 Helianthus annuus
Haze_00685 Corylus avellana
Hma1.2p1_0114F.1_g055460 Hydrangea macrophylla
HPP92_020137 Vanilla planifolia
Hund25017 Selenicereus undatus
Lalb_Chr06g0165731 Lupinus albus
Lj3A877T94 Lonicera japonica
Lj5g0028089 Lotus japonicus
Lsat_1_v5_gn_3_54040 Lactuca sativa
Manes.14G109600 Manihot esculenta
MBI16_g29822_MAGBIO Magnolia biondii
MCO05G366 Micromonas commoda
MD13G1032300 Malus domestica
MD16G1034500 Malus domestica
Medtr1g109070 Medicago truncatula
Medtr4g117060 Medicago truncatula
MELO3C012289.2 Cucumis melo
Migut.L01020 Erythranthe guttata
Migut.O00950 Erythranthe guttata
MSTRG.15906 Avicennia marina
MSTRG.875 Avicennia marina
Nitab4.5_0013146g0010 Nicotiana tabacum
Nn4g24024 Nelumbo nucifera
Oeu036129.1 Olea europaea
Oeu059511.2 Olea europaea
Os05g0554500 Oryza sativa ssp. japonica
PGR119G2355 Punica granatum
PGR142G1573 Punica granatum
PGSC0003DMG400030516 Solanum tuberosum
Phvul.007G034400 Phaseolus vulgaris
Potri.008G126400 Populus trichocarpa
Potri.010G117100 Populus trichocarpa
Pp3c15_5840 Physcomitrium patens
Prupe.1G320100 Prunus persica
Psat6g222680 Pisum sativum
PSO017G4790 Papaver somniferum
PSO339G4228 Papaver somniferum
PSO384G2466 Papaver somniferum
PSO478G0709 Papaver somniferum
PSO782G5692 Papaver somniferum
QL01p003042 Quercus lobata
RcHm_v2.0_Chr4g0434011 Rosa chinensis
Rhsim03G0134600 Rhododendron simsii
Rhsim12G0088500 Rhododendron simsii
Sabra08G0095200 Salix brachista
Sabra16G0274100 Salix brachista
SalBow8G1667 Salvia bowleyana
Sc11g0003970 Simmondsia chinensis
Sed0015008 Sechium edule
SEGI_09717 Sequoiadendron giganteum
SGA_v2.0_scaffold50G18546 Striga asiatica
SMO202G0044 Selaginella moellendorffii
Solyc05g008520.3 Solanum lycopersicum
Sopen05g004360 Solanum pennellii
Sp1g20430 Schrenkiella parvula
Sp5g26320 Schrenkiella parvula
TAR622G1045 Trochodendron aralioides
THA.LOC104812031 Tarenaya hassleriana
Thecc.02G215400 Theobroma cacao
Thecc.02G215500 Theobroma cacao
Thhalv10008033m.g Eutrema salsugineum
Thhalv10018995m.g Eutrema salsugineum
TPR.G4908 Trifolium pratense
TWI79G1332 Tripterygium wilfordii
unitig_749.g14005 Utricularia gibba
vmacro01424 Vaccinium macrocarpon
VMungo0720G0454 Vigna mungo
Zm00001eb295130 Zea mays

User provided reference genes

Program Settings