Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p16080 Brassica napus
A07p16090 Brassica napus
A08p29540 Brassica napus
Aa31LG7G4450 Aethionema arabicum
Actinidia15422 Actinidia chinensis
Actinidia16989 Actinidia chinensis
Ah.00g000180 Amaranthus hybridus
Ah.11g039690 Amaranthus hybridus
AL1G32710 Arabidopsis lyrata
AT1G19980 Arabidopsis thaliana
ATR0810G127 Amborella trichopoda
Atru.chr13.291 Acer truncatum
Atru.chr2.2948 Acer truncatum
Atru.chr2.2949 Acer truncatum
AUR62033908 Chenopodium quinoa
AUR62041912 Chenopodium quinoa
BcaB03g12884 Brassica carinata
BcaB03g14348 Brassica carinata
BcaB03g14419 Brassica carinata
BcaB08g36328 Brassica carinata
BcaB08g37342 Brassica carinata
BcaC07g39015 Brassica carinata
BolC7t42878H Brassica oleracea
BolC8t49626H Brassica oleracea
BraA07t29336Z Brassica rapa
BraA08t34891Z Brassica rapa
C07p23450 Brassica napus
C08p19880 Brassica napus
CAN.G1271.17 Capsicum annuum
CAN.G311.30 Capsicum annuum
CANSAT25G0086 Cannabis sativa
CANSAT78G2470 Cannabis sativa
CARHR020470 Cardamine hirsuta
Carub.0001s1951 Capsella rubella
Ca_00891_v3 Cicer arietinum L.
Cc10_g01680 Coffea canephora
CDE05G3315 Ceratophyllum demersum
Cfa013951 Carpinus fangiana
Ciclev10001635m.g Citrus clementina
CiPaw.07G149800 Carya illinoinensis
CiPaw.08G066500 Carya illinoinensis
ClCG05G018260 Citrullus lanatus
ClCG08G014280 Citrullus lanatus
COL.COLO4_26145 Corchorus olitorius
Cpa.g.sc26.42 Carica papaya
CsaV3_2G029530 Cucumis sativus L.
CsaV3_3G045880 Cucumis sativus L.
CSS0003212 Camellia sinensis var. sinensis
CSS0003502 Camellia sinensis var. sinensis
DCAR_023016 Daucus carota
Dinv31847 Davidia involucrata
Dinv39518 Davidia involucrata
Duzib041G0268 Durio zibethinus
Duzib116G0175 Durio zibethinus
ECA232G3880 Erigeron canadensis
EL10Ac1g02216 Beta vulgaris
Eucgr.F00587 Eucalyptus grandis
FAN15G2782 Fragaria x ananassa
FAN20G3206 Fragaria x ananassa
FAN27G2825 Fragaria x ananassa
FvH4_2g38440 Fragaria vesca
Glyma.09G028700 Glycine max
Glyma.15G134600 Glycine max
Gohir.A05G186500 Gossypium hirsutum
Gohir.A05G257000 Gossypium hirsutum
Gohir.D05G189400 Gossypium hirsutum
Gohir.D05G258500 Gossypium hirsutum
Gorai.009G194600 Gossypium raimondii
Gorai.009G270000 Gossypium raimondii
GSVIVG01009906001 Vitis vinifera
HanXRQChr05g0145181 Helianthus annuus
HanXRQChr11g0322621 Helianthus annuus
Haze_22634 Corylus avellana
HPP92_025683 Vanilla planifolia
Hund05189 Selenicereus undatus
Lalb_Chr20g0120221 Lupinus albus
Lj4A797T57 Lonicera japonica
Lj6g0021117 Lotus japonicus
Lsat_1_v5_gn_9_46920 Lactuca sativa
Manes.05G147400 Manihot esculenta
Manes.18G013500 Manihot esculenta
MBI09_g31922_MAGBIO Magnolia biondii
MBI09_g43704_MAGBIO Magnolia biondii
MD00G1092800 Malus domestica
MD08G1013200 Malus domestica
MD15G1012000 Malus domestica
Medtr2g031630 Medicago truncatula
MELO3C003750.2 Cucumis melo
MELO3C011012.2 Cucumis melo
MELO3C030325.2 Cucumis melo
Migut.C00835 Erythranthe guttata
MSTRG.1192 Avicennia marina
MSTRG.25248 Avicennia marina
Nitab4.5_0002561g0030 Nicotiana tabacum
Nn1g05892 Nelumbo nucifera
Oeu007327.1 Olea europaea
Oeu054693.1 Olea europaea
Os04g0117200 Oryza sativa ssp. japonica
Peaxi162Scf00438g00827 Petunia axillaris
PGR031G2226 Punica granatum
PGR031G2834 Punica granatum
PGSC0003DMG400009864 Solanum tuberosum
Phvul.006G124300 Phaseolus vulgaris
Potri.002G022200 Populus trichocarpa
Potri.005G239500 Populus trichocarpa
Prupe.1G365300 Prunus persica
Psat1g164760 Pisum sativum
PSO170G4377 Papaver somniferum
PSO700G0202 Papaver somniferum
QL02p011634 Quercus lobata
RcHm_v2.0_Chr6g0302861 Rosa chinensis
Rhsim06G0021600 Rhododendron simsii
Sabra02G0018300 Salix brachista
Sabra05G0185100 Salix brachista
SalBow7G1801 Salvia bowleyana
Sc02g0008580 Simmondsia chinensis
Sed0011447 Sechium edule
Sed0019370 Sechium edule
SEGI_34762 Sequoiadendron giganteum
SGA_v2.0_scaffold11G05917 Striga asiatica
SGA_v2.0_scaffold92G28230 Striga asiatica
SHI08069 Sapria himalayana
Solyc04g081450.3 Solanum lycopersicum
Sopen04g035060 Solanum pennellii
Sp1g17770 Schrenkiella parvula
TAR376G0796 Trochodendron aralioides
TAR628G1150 Trochodendron aralioides
THA.LOC104809508 Tarenaya hassleriana
THA.LOC104811410 Tarenaya hassleriana
Thecc.08G044600 Theobroma cacao
Thhalv10008122m.g Eutrema salsugineum
TPR.G15190 Trifolium pratense
TWI12G0454 Tripterygium wilfordii
TWI36G1185 Tripterygium wilfordii
TWI56G0716 Tripterygium wilfordii
unitig_0.g2085 Utricularia gibba
vmacro07586 Vaccinium macrocarpon
vmacro21726 Vaccinium macrocarpon
VMungo0540G2141 Vigna mungo
Zm00001eb121210 Zea mays

User provided reference genes

Program Settings