Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p30770 Brassica napus
Aa31LG11G6570 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3504 Anthoceros agrestis
Ah.10g036310 Amaranthus hybridus
AL6G15390 Arabidopsis lyrata
Aqoxy1G01324 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.JSQZ9G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NV82FA Arachis hypogaea
AT5G05500 Arabidopsis thaliana
ATR0174G015 Amborella trichopoda
Atru.chr12.80 Acer truncatum
AUR62012286 Chenopodium quinoa
AUR62022927 Chenopodium quinoa
BcaB05g21713 Brassica carinata
BcaB05g21714 Brassica carinata
BcaC06g32261 Brassica carinata
BcaC06g32262 Brassica carinata
BolC2t06202H Brassica oleracea
BolC9t59887H Brassica oleracea
BraA02t04851Z Brassica rapa
BraA10t45118Z Brassica rapa
C02p02370 Brassica napus
C09p71260 Brassica napus
CAN.G1268.13 Capsicum annuum
CAN.G19.12 Capsicum annuum
CANSAT56G3078 Cannabis sativa
CANSAT56G4151 Cannabis sativa
CARHR207770 Cardamine hirsuta
Carub.0006s0440 Capsella rubella
Ca_15147_v3 Cicer arietinum L.
Cc02_g06130 Coffea canephora
Cfa001288 Carpinus fangiana
Cfa001290 Carpinus fangiana
Ciclev10033597m.g Citrus clementina
CiPaw.02G194900 Carya illinoinensis
ClCG07G004420 Citrullus lanatus
COL.COLO4_03830 Corchorus olitorius
COL.COLO4_07629 Corchorus olitorius
COL.COLO4_15412 Corchorus olitorius
COL.COLO4_25530 Corchorus olitorius
Cpa.g.sc19.144 Carica papaya
CsaV3_5G010340 Cucumis sativus L.
CSS0015149 Camellia sinensis var. sinensis
CSS0028429 Camellia sinensis var. sinensis
DCAR_011836 Daucus carota
DCAR_024812 Daucus carota
Dinv21761 Davidia involucrata
Duzib106G0906 Durio zibethinus
Duzib114G0491 Durio zibethinus
Duzib128G1408 Durio zibethinus
ECA238G1751 Erigeron canadensis
ECA238G2582 Erigeron canadensis
EL10Ac2g04878 Beta vulgaris
Eucgr.G03079 Eucalyptus grandis
FAN01G2198 Fragaria x ananassa
FAN01G2364 Fragaria x ananassa
FAN03G1502 Fragaria x ananassa
FAN06G3559 Fragaria x ananassa
FAN10G0251 Fragaria x ananassa
FAN10G1213 Fragaria x ananassa
FvH4_7g24910 Fragaria vesca
FvH4_7g24940 Fragaria vesca
Glyma.11G232100 Glycine max
Glyma.18G025200 Glycine max
Gohir.A10G238750 Gossypium hirsutum
Gohir.A10G238801 Gossypium hirsutum
Gohir.A10G238851 Gossypium hirsutum
Gohir.D10G250700 Gossypium hirsutum
Gorai.011G291100 Gossypium raimondii
GSVIVG01032773001 Vitis vinifera
HanXRQChr07g0203111 Helianthus annuus
HanXRQChr14g0459401 Helianthus annuus
Haze_17260 Corylus avellana
Haze_17261 Corylus avellana
Hma1.2p1_3227F.1_g334240 Hydrangea macrophylla
HPP92_018099 Vanilla planifolia
Lalb_Chr08g0231561 Lupinus albus
Lalb_Chr11g0075051 Lupinus albus
Lj1C959T17 Lonicera japonica
Lj6g0021216 Lotus japonicus
Lj8C63T7 Lonicera japonica
LjContig00357g0002708 Lotus japonicus
Lsat_1_v5_gn_2_124301 Lactuca sativa
Lsat_1_v5_gn_2_124321 Lactuca sativa
Manes.07G132700 Manihot esculenta
Manes.10G009700 Manihot esculenta
MBI03_g21447_MAGBIO Magnolia biondii
MBI03_g21448_MAGBIO Magnolia biondii
MBI03_g43893_MAGBIO Magnolia biondii
MBI15_g40303_MAGBIO Magnolia biondii
MD01G1156800 Malus domestica
MD07G1225500 Malus domestica
Medtr3g071470 Medicago truncatula
Medtr5g014340 Medicago truncatula
MELO3C018370.2 Cucumis melo
Migut.F00654 Erythranthe guttata
Nitab4.5_0000058g0190 Nicotiana tabacum
Nitab4.5_0000666g0120 Nicotiana tabacum
Nitab4.5_0000789g0080 Nicotiana tabacum
Os01g0164075 Oryza sativa ssp. japonica
Os01g0164300 Oryza sativa ssp. japonica
PGR142G1835 Punica granatum
PGSC0003DMG400027122 Solanum tuberosum
PGSC0003DMG400030033 Solanum tuberosum
Phvul.001G245200 Phaseolus vulgaris
Potri.008G072000 Populus trichocarpa
Potri.010G185400 Populus trichocarpa
Prupe.2G254300 Prunus persica
Prupe.2G254400 Prunus persica
Psat5g130360 Pisum sativum
PSO017G6429 Papaver somniferum
PSO339G0551 Papaver somniferum
PSO349G0001 Papaver somniferum
PSO801G0522 Papaver somniferum
QL08p063579 Quercus lobata
RcHm_v2.0_Chr1g0370791 Rosa chinensis
RcHm_v2.0_Chr1g0370801 Rosa chinensis
RcHm_v2.0_Chr1g0370811 Rosa chinensis
Sabra08G0053200 Salix brachista
Sabra10G0142600 Salix brachista
SalBow3G1256 Salvia bowleyana
Sc10g0002540 Simmondsia chinensis
Sed0003622 Sechium edule
Sed0020461 Sechium edule
SGA_v2.0_scaffold44G16665 Striga asiatica
SMO069G0003 Selaginella moellendorffii
SMO133G0035 Selaginella moellendorffii
Sopen05g031040 Solanum pennellii
Sopen06g016860 Solanum pennellii
Sp6g37350 Schrenkiella parvula
TAR623G0989 Trochodendron aralioides
TAR633G0722 Trochodendron aralioides
THA.LOC104816535 Tarenaya hassleriana
THA.LOC104826842 Tarenaya hassleriana
Thecc.10G012300 Theobroma cacao
Thhalv10014798m.g Eutrema salsugineum
TPR.G30151 Trifolium pratense
TWI73G0354 Tripterygium wilfordii
VMungo1383G2982 Vigna mungo
Zm00001eb123470 Zea mays

User provided reference genes

Program Settings