Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p05550 Brassica napus
A10p06260 Brassica napus
Aa31LG9G12690 Aethionema arabicum
Aa31sc119G90 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.508 Anthoceros agrestis
Actinidia29851 Actinidia chinensis
Actinidia38034 Actinidia chinensis
Ah.03g134890 Amaranthus hybridus
AL1G54040 Arabidopsis lyrata
Aqoxy6G00937 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.APL3GL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N94XAP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P2WCGJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R2S7J0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y0EE8X Arachis hypogaea
AT1G47640 Arabidopsis thaliana
ATR0733G175 Amborella trichopoda
Atru.BG.240.p Acer truncatum
Atru.chr13.591 Acer truncatum
AUR62033873 Chenopodium quinoa
BcaB04g17508 Brassica carinata
BcaB07g33823 Brassica carinata
BcaC07g37205 Brassica carinata
BcaC08g42963 Brassica carinata
BolC6t35332H Brassica oleracea
BolC8t47397H Brassica oleracea
BraA08t32559Z Brassica rapa
BraA10t42894Z Brassica rapa
C06p02040 Brassica napus
C08p06100 Brassica napus
CAN.G1002.2 Capsicum annuum
CAN.G371.92 Capsicum annuum
CANSAT56G1446 Cannabis sativa
CARHR034590 Cardamine hirsuta
CARHR037270 Cardamine hirsuta
CARHR037280 Cardamine hirsuta
CARHR054190 Cardamine hirsuta
CARHR259240 Cardamine hirsuta
Carub.0001s3642 Capsella rubella
Ca_15981_v3 Cicer arietinum L.
CBR_g99 Chara braunii
Cc10_g03660 Coffea canephora
CDE04G3466 Ceratophyllum demersum
Cfa018481 Carpinus fangiana
Ciclev10002374m.g Citrus clementina
CiPaw.15G066600 Carya illinoinensis
CiPaw.16G051900 Carya illinoinensis
ClCG05G019450 Citrullus lanatus
COL.COLO4_26415 Corchorus olitorius
Cpa.g.sc64.18 Carica papaya
CsaV3_3G044590 Cucumis sativus L.
CSS0002701 Camellia sinensis var. sinensis
Dinv36016 Davidia involucrata
Dinv39358 Davidia involucrata
Duzib093G1518 Durio zibethinus
Duzib116G0868 Durio zibethinus
ECA247G3714 Erigeron canadensis
EL10Ac1g01754 Beta vulgaris
Eucgr.F02400 Eucalyptus grandis
FAN15G3574 Fragaria x ananassa
FAN20G0953 Fragaria x ananassa
FAN27G0003 Fragaria x ananassa
FvH4_2g40630 Fragaria vesca
Glyma.04G035800 Glycine max
Glyma.06G035800 Glycine max
Gohir.A05G198900 Gossypium hirsutum
Gohir.A06G015000 Gossypium hirsutum
Gohir.D05G201600 Gossypium hirsutum
Gohir.D06G013000 Gossypium hirsutum
Gorai.009G207300 Gossypium raimondii
Gorai.010G015600 Gossypium raimondii
GSVIVG01009588001 Vitis vinifera
HanXRQChr02g0046441 Helianthus annuus
Haze_17591 Corylus avellana
Hma1.2p1_0260F.1_g104510 Hydrangea macrophylla
HPP92_019640 Vanilla planifolia
Hund26608 Selenicereus undatus
Lalb_Chr08g0245731 Lupinus albus
Lalb_Chr23g0266811 Lupinus albus
Lj1g0015279 Lotus japonicus
Lsat_1_v5_gn_1_19180 Lactuca sativa
Manes.05G168700 Manihot esculenta
Manes.18G025300 Manihot esculenta
Mapoly0136s0007 Marchantia polymorpha
MBI16_g31482_MAGBIO Magnolia biondii
MD08G1039400 Malus domestica
MD11G1104700 Malus domestica
MD15G1034100 Malus domestica
Medtr3g100940 Medicago truncatula
Migut.C00650 Erythranthe guttata
Migut.N02685 Erythranthe guttata
Migut.O00871 Erythranthe guttata
MSTRG.22278 Avicennia marina
MSTRG.24315 Avicennia marina
Nitab4.5_0000453g0110 Nicotiana tabacum
Nitab4.5_0000790g0020 Nicotiana tabacum
Nn5g29408 Nelumbo nucifera
Nn6g32145 Nelumbo nucifera
Oeu006165.1 Olea europaea
Oeu028451.1 Olea europaea
Os03g0766000 Oryza sativa ssp. japonica
Peaxi162Scf00064g00217 Petunia axillaris
PGR031G2816 Punica granatum
PGSC0003DMG400015450 Solanum tuberosum
Phvul.009G061800 Phaseolus vulgaris
Potri.002G130100 Populus trichocarpa
Potri.014G037100 Populus trichocarpa
Pp3c3_13070 Physcomitrium patens
Prupe.1G387900 Prunus persica
Psat5g045200 Pisum sativum
PSO170G5983 Papaver somniferum
PSO210G2601 Papaver somniferum
QL02p006494 Quercus lobata
RcHm_v2.0_Chr6g0300041 Rosa chinensis
Rhsim06G0040800 Rhododendron simsii
Sabra02G0102000 Salix brachista
Sabra14G0026700 Salix brachista
SalBow8G4730 Salvia bowleyana
Sc15g0006600 Simmondsia chinensis
Sed0011570 Sechium edule
Sed0015581 Sechium edule
SEGI_18559 Sequoiadendron giganteum
SGA_v2.0_scaffold28G11772 Striga asiatica
SMO119G0125 Selaginella moellendorffii
SMO163G0011 Selaginella moellendorffii
Sopen12g030860 Solanum pennellii
Sp1g34660 Schrenkiella parvula
TAR381G1584 Trochodendron aralioides
TAR625G1030 Trochodendron aralioides
THA.LOC104803401 Tarenaya hassleriana
THA.LOC104813200 Tarenaya hassleriana
Thecc.08G017100 Theobroma cacao
Thhalv10011754m.g Eutrema salsugineum
TPR.G26072 Trifolium pratense
TWI56G0523 Tripterygium wilfordii
unitig_26.g10028 Utricularia gibba
vmacro21583 Vaccinium macrocarpon
VMungo1309G2021 Vigna mungo
Zm00001eb058600 Zea mays
Zm00001eb214040 Zea mays

User provided reference genes

Program Settings