Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p47350 Brassica napus
Actinidia06231 Actinidia chinensis
Actinidia10153 Actinidia chinensis
Actinidia21638 Actinidia chinensis
Actinidia21639 Actinidia chinensis
Ah.12g062760 Amaranthus hybridus
AL5G35440 Arabidopsis lyrata
Aqoxy2G00390 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5X1NVT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PZXV1H Arachis hypogaea
AT3G54390 Arabidopsis thaliana
ATR0580G033 Amborella trichopoda
ATR0745G016 Amborella trichopoda
Atru.BG.258.p Acer truncatum
Atru.chr12.1256 Acer truncatum
AUR62026883 Chenopodium quinoa
AUR62032637 Chenopodium quinoa
BcaB01g00198 Brassica carinata
BcaB01g00200 Brassica carinata
BolC8t49582H Brassica oleracea
BolC8t50564H Brassica oleracea
BraA09t40196Z Brassica rapa
C07p20630 Brassica napus
C08p19600 Brassica napus
C08p29580 Brassica napus
CANSAT56G2194 Cannabis sativa
CARHR164300 Cardamine hirsuta
Carub.0005s2098 Capsella rubella
Cc04_g03250 Coffea canephora
Cfa010925 Carpinus fangiana
Ciclev10001759m.g Citrus clementina
CiPaw.13G014700 Carya illinoinensis
CiPaw.14G008400 Carya illinoinensis
ClCG05G026870 Citrullus lanatus
COL.COLO4_20677 Corchorus olitorius
Cpa.g.sc403.1 Carica papaya
CsaV3_5G036820 Cucumis sativus L.
CSS0009331 Camellia sinensis var. sinensis
CSS0012102 Camellia sinensis var. sinensis
CSS0019205 Camellia sinensis var. sinensis
CSS0050144 Camellia sinensis var. sinensis
DCAR_022336 Daucus carota
Dinv32020 Davidia involucrata
Dinv37794 Davidia involucrata
Dinv44691 Davidia involucrata
Duzib114G0464 Durio zibethinus
Duzib128G1013 Durio zibethinus
ECA236G4922 Erigeron canadensis
EL10Ac2g02788 Beta vulgaris
Eucgr.G03225 Eucalyptus grandis
FAN01G0832 Fragaria x ananassa
FAN03G2738 Fragaria x ananassa
FAN06G2791 Fragaria x ananassa
FAN10G3541 Fragaria x ananassa
FvH4_7g03380 Fragaria vesca
Glyma.04G135400 Glycine max
Glyma.11G156700 Glycine max
Glyma.13G195800 Glycine max
Glyma.15G234100 Glycine max
Gohir.A05G400000 Gossypium hirsutum
Gohir.A10G186400 Gossypium hirsutum
Gohir.D04G015900 Gossypium hirsutum
Gohir.D10G193400 Gossypium hirsutum
Gorai.011G216400 Gossypium raimondii
Gorai.012G018400 Gossypium raimondii
GSVIVG01016139001 Vitis vinifera
GSVIVG01036668001 Vitis vinifera
HanXRQChr04g0114451 Helianthus annuus
Haze_03017 Corylus avellana
Haze_03024 Corylus avellana
Hma1.2p1_0837F.1_g226020 Hydrangea macrophylla
Hma1.2p1_1202F.1_g266880 Hydrangea macrophylla
HPP92_021953 Vanilla planifolia
Hund13372 Selenicereus undatus
Lalb_Chr04g0264121 Lupinus albus
Lj1P43T47 Lonicera japonica
Lj3g0004859 Lotus japonicus
Lj9A658G57 Lonicera japonica
Lj9P541T37 Lonicera japonica
Lsat_1_v5_gn_7_31640 Lactuca sativa
Manes.04G158200 Manihot esculenta
Manes.11G006200 Manihot esculenta
MBI14_g08072_MAGBIO Magnolia biondii
MBI15_g26087_MAGBIO Magnolia biondii
MBI19_g08795_MAGBIO Magnolia biondii
MD02G1283400 Malus domestica
MD07G1048900 Malus domestica
Medtr1g037650 Medicago truncatula
Medtr3g014280 Medicago truncatula
MELO3C012478.2 Cucumis melo
Migut.B01236 Erythranthe guttata
MSTRG.20509 Avicennia marina
MSTRG.5070 Avicennia marina
Nitab4.5_0003481g0080 Nicotiana tabacum
Nitab4.5_0005808g0060 Nicotiana tabacum
Nn2g12570 Nelumbo nucifera
Nn7g36736 Nelumbo nucifera
Oeu011568.1 Olea europaea
Os09g0558200 Oryza sativa ssp. japonica
Peaxi162Scf00082g00119 Petunia axillaris
PGR031G1717 Punica granatum
PGSC0003DMG400005408 Solanum tuberosum
Phvul.005G025700 Phaseolus vulgaris
Potri.001G028400 Populus trichocarpa
Potri.003G195300 Populus trichocarpa
Prupe.2G039000 Prunus persica
Psat5g222560 Pisum sativum
PSO675G0554 Papaver somniferum
PSO732G0622 Papaver somniferum
QL04p017576 Quercus lobata
RcHm_v2.0_Chr1g0325721 Rosa chinensis
Rhsim07G0067700 Rhododendron simsii
Sabra01G0020800 Salix brachista
Sabra03G0145700 Salix brachista
SalBow5G3046 Salvia bowleyana
Sc10g0004460 Simmondsia chinensis
Sed0010103 Sechium edule
SEGI_13137 Sequoiadendron giganteum
SEGI_17304 Sequoiadendron giganteum
SEGI_19175 Sequoiadendron giganteum
SEGI_19357 Sequoiadendron giganteum
Solyc01g096470.3 Solanum lycopersicum
Sopen01g040200 Solanum pennellii
Sp5g08020 Schrenkiella parvula
TAR383G0099 Trochodendron aralioides
TAR623G1442 Trochodendron aralioides
TAR625G1444 Trochodendron aralioides
TAR633G0640 Trochodendron aralioides
TAR636G2939 Trochodendron aralioides
THA.LOC104824196 Tarenaya hassleriana
Thecc.10G150900 Theobroma cacao
Thhalv10010575m.g Eutrema salsugineum
TPR.G40495 Trifolium pratense
TWI15G0105 Tripterygium wilfordii
TWI38G0432 Tripterygium wilfordii
vmacro13758 Vaccinium macrocarpon
VMungo1080G0084 Vigna mungo
VMungo1127G1750 Vigna mungo
Zm00001eb104640 Zea mays
Zm00001eb320470 Zea mays

User provided reference genes

Program Settings