Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p11340 Brassica napus
A07p45420 Brassica napus
Aa31LG4G370 Aethionema arabicum
Aa31LG7G100 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2189 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1642 Anthoceros agrestis
Actinidia15983 Actinidia chinensis
AL1G27420 Arabidopsis lyrata
AL2G41440 Arabidopsis lyrata
AL2G41450 Arabidopsis lyrata
Aqoxy7G02293 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.JVJR89 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y6ZEHB Arachis hypogaea
AT1G15330 Arabidopsis thaliana
AT1G80090 Arabidopsis thaliana
ATR0800G035 Amborella trichopoda
Atru.chr1.2934 Acer truncatum
Atru.chr1.2936 Acer truncatum
AUR62011516 Chenopodium quinoa
AUR62016335 Chenopodium quinoa
BcaB02g08721 Brassica carinata
BcaC05g25470 Brassica carinata
BcaC05g25495 Brassica carinata
BcaC08g47570 Brassica carinata
BolC5t30083H Brassica oleracea
BolC6t40438H Brassica oleracea
BraA06t24313Z Brassica rapa
BraA07t32046Z Brassica rapa
C05p13460 Brassica napus
C06p54250 Brassica napus
CAN.G1503.8 Capsicum annuum
CANSAT56G0380 Cannabis sativa
CARHR015860 Cardamine hirsuta
CARHR074410 Cardamine hirsuta
Carub.0001s1508 Capsella rubella
Carub.0002s2743 Capsella rubella
Ca_01055_v3 Cicer arietinum L.
CBR_g24374 Chara braunii
CBR_g38673 Chara braunii
Cc04_g04410 Coffea canephora
Cfa001959 Carpinus fangiana
Ciclev10026304m.g Citrus clementina
CiPaw.02G157400 Carya illinoinensis
ClCG07G012450 Citrullus lanatus
COL.COLO4_11947 Corchorus olitorius
Cpa.g.sc10.270 Carica papaya
CsaV3_4G001710 Cucumis sativus L.
CSS0011845 Camellia sinensis var. sinensis
CSS0036664 Camellia sinensis var. sinensis
DCAR_021346 Daucus carota
Dinv30606 Davidia involucrata
Duzib160G0683 Durio zibethinus
ECA232G3027 Erigeron canadensis
EL10Ac9g21898 Beta vulgaris
Eucgr.F03878 Eucalyptus grandis
Eucgr.J03066 Eucalyptus grandis
FAN05G5161 Fragaria x ananassa
FAN09G2673 Fragaria x ananassa
FAN14G5059 Fragaria x ananassa
FvH4_6g29660 Fragaria vesca
Glyma.13G365800 Glycine max
Glyma.15G007300 Glycine max
Gohir.A05G123300 Gossypium hirsutum
Gohir.D05G124200 Gossypium hirsutum
Gorai.009G128200 Gossypium raimondii
GSVIVG01017342001 Vitis vinifera
HanXRQChr16g0500301 Helianthus annuus
Haze_16562 Corylus avellana
Hma1.2p1_0090F.1_g046010 Hydrangea macrophylla
Hma1.2p1_0090F.1_g046015 Hydrangea macrophylla
Hma1.2p1_1144F.1_g261310 Hydrangea macrophylla
HPP92_010901 Vanilla planifolia
HPP92_016981 Vanilla planifolia
Hund06557 Selenicereus undatus
Lalb_Chr14g0373811 Lupinus albus
Lalb_Chr22g0350841 Lupinus albus
Lj3g0027830 Lotus japonicus
Lj9P500T36 Lonicera japonica
Lsat_1_v5_gn_4_89921 Lactuca sativa
Manes.11G057000 Manihot esculenta
Mapoly0007s0086 Marchantia polymorpha
MBI14_g16402_MAGBIO Magnolia biondii
MD17G1212300 Malus domestica
Medtr2g103890 Medicago truncatula
Medtr2g103910 Medicago truncatula
MELO3C017863.2 Cucumis melo
Migut.I00762 Erythranthe guttata
MSTRG.22747 Avicennia marina
Nitab4.5_0000373g0080 Nicotiana tabacum
Nitab4.5_0006769g0010 Nicotiana tabacum
Nn1g00750 Nelumbo nucifera
Nn8g39510 Nelumbo nucifera
Oeu045134.1 Olea europaea
Os02g0158900 Oryza sativa ssp. japonica
Peaxi162Scf00207g00638 Petunia axillaris
PGR031G2541 Punica granatum
PGR102G0885 Punica granatum
PGR102G1999 Punica granatum
PGSC0003DMG400028509 Solanum tuberosum
Phvul.005G178300 Phaseolus vulgaris
Pp3c13_16980 Physcomitrium patens
Pp3c3_23830 Physcomitrium patens
Prupe.3G087600 Prunus persica
Psat1g035880 Pisum sativum
Psat5g302720 Pisum sativum
Psat6g000160 Pisum sativum
Psat6g211360 Pisum sativum
PSO017G6540 Papaver somniferum
PSO170G0224 Papaver somniferum
QL05p029759 Quercus lobata
QL05p029765 Quercus lobata
QL05p030112 Quercus lobata
QL05p030118 Quercus lobata
RcHm_v2.0_Chr2g0135251 Rosa chinensis
Rhsim12G0191100 Rhododendron simsii
Sc06g0005900 Simmondsia chinensis
Sc06g0005910 Simmondsia chinensis
Sed0012798 Sechium edule
SEGI_27934 Sequoiadendron giganteum
SEGI_39315 Sequoiadendron giganteum
SGA_v2.0_scaffold5G02698 Striga asiatica
SHI11227 Sapria himalayana
SMO201G0050 Selaginella moellendorffii
Solyc06g068160.3 Solanum lycopersicum
Sopen06g025430 Solanum pennellii
Sp1g13650 Schrenkiella parvula
Sp5g35710 Schrenkiella parvula
TAR383G0332 Trochodendron aralioides
TAR383G0924 Trochodendron aralioides
THA.LOC104812509 Tarenaya hassleriana
THA.LOC104812511 Tarenaya hassleriana
Thhalv10008048m.g Eutrema salsugineum
Thhalv10019455m.g Eutrema salsugineum
TPR.G37199 Trifolium pratense
TWI12G0099 Tripterygium wilfordii
unitig_0.g1114 Utricularia gibba
vmacro16896 Vaccinium macrocarpon
VMungo1080G0510 Vigna mungo
VMungo1127G1748 Vigna mungo
Zm00001eb232620 Zea mays

User provided reference genes

Program Settings