Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p08570 Brassica napus
Aa31LG8G10780 Aethionema arabicum
Aa31LG9G4030 Aethionema arabicum
Actinidia13984 Actinidia chinensis
Actinidia39967 Actinidia chinensis
Ah.05g178960 Amaranthus hybridus
AL3G39170 Arabidopsis lyrata
AL7G42970 Arabidopsis lyrata
AL8G12500 Arabidopsis lyrata
Aqoxy2G03857 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.58ZGJB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AN5TC9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U1G5UA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XWTR79 Arachis hypogaea
AT3G24100 Arabidopsis thaliana
AT4G13615 Arabidopsis thaliana
ATR1145G024 Amborella trichopoda
Atru.chr4.1700 Acer truncatum
BcaB03g16069 Brassica carinata
BcaB04g17662 Brassica carinata
BcaC07g37341 Brassica carinata
BolC4t25811H Brassica oleracea
BolC8t47637H Brassica oleracea
BraA04t16551Z Brassica rapa
C08p07830 Brassica napus
CAN.G1635.9 Capsicum annuum
CANSAT11G1273 Cannabis sativa
CARHR100100 Cardamine hirsuta
CARHR219300 Cardamine hirsuta
Carub.0003s2440 Capsella rubella
Carub.0007s2892 Capsella rubella
Carub.0007s2961 Capsella rubella
Ca_17417_v3 Cicer arietinum L.
Cc01_g16920 Coffea canephora
Cc03_g07880 Coffea canephora
Ciclev10006390m.g Citrus clementina
CiPaw.01G120800 Carya illinoinensis
CiPaw.03G148500 Carya illinoinensis
ClCG06G007830 Citrullus lanatus
Cpa.g.sc2154.1 Carica papaya
Cpa.g.sc8.142 Carica papaya
Cre06.g278238 Chlamydomonas reinhardtii
CsaV3_2G011550 Cucumis sativus L.
CSS0011220 Camellia sinensis var. sinensis
CSS0011663 Camellia sinensis var. sinensis
Dinv27235 Davidia involucrata
Duzib133G0368 Durio zibethinus
Duzib138G0965 Durio zibethinus
Duzib211G0320 Durio zibethinus
EL10Ac1g00186 Beta vulgaris
EL10Ac3g07484 Beta vulgaris
Eucgr.H00051 Eucalyptus grandis
FAN07G0843 Fragaria x ananassa
FAN12G0355 Fragaria x ananassa
FAN15G3619 Fragaria x ananassa
FAN17G0397 Fragaria x ananassa
FvH4_4g16450 Fragaria vesca
Glyma.08G351700 Glycine max
Glyma.16G094600 Glycine max
Glyma.18G164200 Glycine max
Gohir.A07G157232 Gossypium hirsutum
Gohir.A07G200800 Gossypium hirsutum
Gohir.A08G110725 Gossypium hirsutum
Gohir.A08G195125 Gossypium hirsutum
Gohir.D07G163401 Gossypium hirsutum
Gohir.D07G207100 Gossypium hirsutum
Gorai.001G187200 Gossypium raimondii
Gorai.001G233500 Gossypium raimondii
Gorai.004G226200 Gossypium raimondii
GSVIVG01003386001 Vitis vinifera
GSVIVG01021052001 Vitis vinifera
Haze_11612 Corylus avellana
Haze_24813 Corylus avellana
Hma1.2p1_0187F.1_g082170 Hydrangea macrophylla
Hund16751 Selenicereus undatus
Hund27148 Selenicereus undatus
Lalb_Chr01g0022281 Lupinus albus
Lalb_Chr07g0194291 Lupinus albus
Lalb_Chr19g0125681 Lupinus albus
Lj1g0002931 Lotus japonicus
Lj3g0027829 Lotus japonicus
Lsat_1_v5_gn_6_60280 Lactuca sativa
Lsat_1_v5_gn_8_89780 Lactuca sativa
Manes.03G147401 Manihot esculenta
Manes.12G045600 Manihot esculenta
Manes.15G054000 Manihot esculenta
Mapoly0075s0018 Marchantia polymorpha
MD04G1009100 Malus domestica
MD05G1174200 Malus domestica
Medtr7g056410 Medicago truncatula
Medtr8g013640 Medicago truncatula
MELO3C020447.2 Cucumis melo
MELO3C021034.2 Cucumis melo
Migut.D02491 Erythranthe guttata
Migut.K01238 Erythranthe guttata
Migut.N00389 Erythranthe guttata
Nn1g07886 Nelumbo nucifera
Nn3g20031 Nelumbo nucifera
Os01g0332700 Oryza sativa ssp. japonica
Os05g0407100 Oryza sativa ssp. japonica
Os11g0425600 Oryza sativa ssp. japonica
Peaxi162Scf00047g00517 Petunia axillaris
Peaxi162Scf00594g00523 Petunia axillaris
PGR142G1434 Punica granatum
PGSC0003DMG400031295 Solanum tuberosum
Phvul.008G127837 Phaseolus vulgaris
Phvul.010G019201 Phaseolus vulgaris
Phvul.010G019701 Phaseolus vulgaris
Potri.001G315400 Populus trichocarpa
Potri.014G056600 Populus trichocarpa
Potri.017G055501 Populus trichocarpa
Pp3c12_4160 Physcomitrium patens
Pp3c12_4180 Physcomitrium patens
Pp3c13_10560 Physcomitrium patens
Pp3c4_17970 Physcomitrium patens
Prupe.1G008500 Prunus persica
Prupe.8G201600 Prunus persica
Psat3g147360 Pisum sativum
Psat4g203440 Pisum sativum
PSO017G2416 Papaver somniferum
PSO063G0044 Papaver somniferum
Rhsim02G0057300 Rhododendron simsii
Rhsim13G0046400 Rhododendron simsii
Sc05g0002070 Simmondsia chinensis
Sc19g0007160 Simmondsia chinensis
Sed0009755 Sechium edule
TAR633G2004 Trochodendron aralioides
THA.LOC104804811 Tarenaya hassleriana
THA.LOC104808711 Tarenaya hassleriana
Thecc.01G224300 Theobroma cacao
Thhalv10002785m.g Eutrema salsugineum
Thhalv10026728m.g Eutrema salsugineum
Thhalv10026730m.g Eutrema salsugineum
TPR.G14533 Trifolium pratense
TWI75G0430 Tripterygium wilfordii
unitig_736.g22466 Utricularia gibba
VMungo0331G1336 Vigna mungo
VMungo1383G3675 Vigna mungo
Zm00001eb287790 Zea mays
Zm00001eb356280 Zea mays

User provided reference genes

Program Settings