Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p62550 Brassica napus
Aa31LG1G1000 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2416 Anthoceros agrestis
Actinidia33219 Actinidia chinensis
Actinidia33623 Actinidia chinensis
Ah.02g129440 Amaranthus hybridus
Ah.03g134770 Amaranthus hybridus
Ah.05g176070 Amaranthus hybridus
AL1G25870 Arabidopsis lyrata
Aqoxy3G03473 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.HIV449 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YEC905 Arachis hypogaea
AT1G14030 Arabidopsis thaliana
ATR0564G531 Amborella trichopoda
Atru.chr11.1727 Acer truncatum
Atru.chr11.1728 Acer truncatum
AUR62005833 Chenopodium quinoa
AUR62032826 Chenopodium quinoa
BcaB08g34359 Brassica carinata
BcaC05g25299 Brassica carinata
BolC5t29924H Brassica oleracea
BolC5t29925H Brassica oleracea
BolC8t52161H Brassica oleracea
BraA09t41618Z Brassica rapa
C05p11780 Brassica napus
C08p46110 Brassica napus
CAN.G964.12 Capsicum annuum
CAN.G964.8 Capsicum annuum
CANSAT64G0403 Cannabis sativa
CARHR014400 Cardamine hirsuta
Carub.0001s1372 Capsella rubella
Ca_08719_v3 Cicer arietinum L.
CBR_g780 Chara braunii
Cc11_g12670 Coffea canephora
CDE04G2362 Ceratophyllum demersum
CDE07G0572 Ceratophyllum demersum
Cfa008936 Carpinus fangiana
Cfa023385 Carpinus fangiana
Ciclev10031325m.g Citrus clementina
CiPaw.05G130300 Carya illinoinensis
CiPaw.07G071800 Carya illinoinensis
ClCG09G021880 Citrullus lanatus
COL.COLO4_27983 Corchorus olitorius
Cpa.g.sc480.3 Carica papaya
Cpa.g.sc991.1 Carica papaya
Cre16.g661350 Chlamydomonas reinhardtii
CsaV3_2G010860 Cucumis sativus L.
CSS0014292 Camellia sinensis var. sinensis
CSS0028557 Camellia sinensis var. sinensis
DCAR_030997 Daucus carota
Dinv16684 Davidia involucrata
Dinv16685 Davidia involucrata
Duzib251G0039 Durio zibethinus
ECA246G4417 Erigeron canadensis
EL10Ac6g13252 Beta vulgaris
Eucgr.B00941 Eucalyptus grandis
Eucgr.B01036 Eucalyptus grandis
Eucgr.B01038 Eucalyptus grandis
Eucgr.B01051 Eucalyptus grandis
Eucgr.G02479 Eucalyptus grandis
Eucgr.G02480 Eucalyptus grandis
Eucgr.J01829 Eucalyptus grandis
FAN07G2817 Fragaria x ananassa
FAN12G1233 Fragaria x ananassa
FAN17G1535 Fragaria x ananassa
FAN22G2029 Fragaria x ananassa
FvH4_4g30820 Fragaria vesca
Glyma.01G059400 Glycine max
Glyma.07G228300 Glycine max
Glyma.20G031600 Glycine max
Gohir.A03G102200 Gossypium hirsutum
Gohir.D02G127000 Gossypium hirsutum
Gorai.005G142600 Gossypium raimondii
GSVIVG01003217001 Vitis vinifera
HanXRQChr15g0476951 Helianthus annuus
Haze_11965 Corylus avellana
Hma1.2p1_0354F.1_g133870 Hydrangea macrophylla
Hma1.2p1_0354F.1_g133880 Hydrangea macrophylla
Hma1.2p1_0354F.1_g133890 Hydrangea macrophylla
Hma1.2p1_0483F.1_g162720 Hydrangea macrophylla
HPP92_011000 Vanilla planifolia
HPP92_011001 Vanilla planifolia
Hund25214 Selenicereus undatus
Lalb_Chr05g0220241 Lupinus albus
Lalb_Chr16g0385691 Lupinus albus
Lj4g0024233 Lotus japonicus
Lsat_1_v5_gn_3_51901 Lactuca sativa
Manes.01G033300 Manihot esculenta
Mapoly0065s0091 Marchantia polymorpha
MBI02_g14233_MAGBIO Magnolia biondii
MCO07G490 Micromonas commoda
MCO12G473 Micromonas commoda
MD16G1067900 Malus domestica
Medtr4g082305 Medicago truncatula
MELO3C008524.2 Cucumis melo
Migut.L01253 Erythranthe guttata
Nitab4.5_0000391g0340 Nicotiana tabacum
Nitab4.5_0011915g0020 Nicotiana tabacum
Oeu021071.2 Olea europaea
Os09g0411650 Oryza sativa ssp. japonica
Peaxi162Scf00222g00327 Petunia axillaris
PGR119G0095 Punica granatum
PGR119G2207 Punica granatum
PGSC0003DMG400028348 Solanum tuberosum
PGSC0003DMG400028394 Solanum tuberosum
Phvul.002G169400 Phaseolus vulgaris
Potri.008G090500 Populus trichocarpa
Pp3c3_17260 Physcomitrium patens
PRCOL_00000980 Prasinoderma coloniale
PRCOL_00002597 Prasinoderma coloniale
Prupe.1G278900 Prunus persica
Psat7g156240 Pisum sativum
PSO063G1835 Papaver somniferum
PSO063G4701 Papaver somniferum
PSO384G2363 Papaver somniferum
QL03p069503 Quercus lobata
RcHm_v2.0_Chr4g0439211 Rosa chinensis
Rhsim12G0125500 Rhododendron simsii
Rhsim12G0132700 Rhododendron simsii
RhsimUnG0242900 Rhododendron simsii
Sabra08G0067900 Salix brachista
Sc04g0007920 Simmondsia chinensis
Sed0000456 Sechium edule
SGA_v2.0_scaffold455G51903 Striga asiatica
SMO367G0558 Selaginella moellendorffii
Solyc05g013150.4 Solanum lycopersicum
Solyc05g013160.4 Solanum lycopersicum
Sopen05g007890 Solanum pennellii
Sopen05g007900 Solanum pennellii
Sp1g12390 Schrenkiella parvula
TAR622G0968 Trochodendron aralioides
THA.LOC104801808 Tarenaya hassleriana
Thecc.02G340400 Theobroma cacao
Thhalv10007614m.g Eutrema salsugineum
TPR.G34023 Trifolium pratense
TWI79G0373 Tripterygium wilfordii
unitig_22.g6505 Utricularia gibba
vmacro16348 Vaccinium macrocarpon
VMungo0251G2245 Vigna mungo
Zm00001eb312420 Zea mays

User provided reference genes

Program Settings