Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p26380 Brassica napus
Aa31LG10G6920 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2686 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.5105 Anthoceros agrestis
Actinidia16719 Actinidia chinensis
Actinidia19517 Actinidia chinensis
Ah.14g086480 Amaranthus hybridus
AL4G30430 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.7EEG5T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GU59FH Arachis hypogaea
AT2G34460 Arabidopsis thaliana
ATR0585G099 Amborella trichopoda
Atru.chr10.1137 Acer truncatum
Atru.chr10.1150 Acer truncatum
Atru.chr10.1291 Acer truncatum
Atru.chr10.1315 Acer truncatum
Atru.chr10.274 Acer truncatum
AUR62027611 Chenopodium quinoa
AUR62030234 Chenopodium quinoa
BcaB06g28771 Brassica carinata
BolC4t27845H Brassica oleracea
BraA04t18142Z Brassica rapa
C04p63790 Brassica napus
CAN.G650.43 Capsicum annuum
CAN.G650.46 Capsicum annuum
CANSAT35G1403 Cannabis sativa
CARHR128560 Cardamine hirsuta
CARHR272540 Cardamine hirsuta
Carub.0004s1613 Capsella rubella
Ca_21657_v3 Cicer arietinum L.
Cc09_g09230 Coffea canephora
CDE06G1617 Ceratophyllum demersum
Cfa000960 Carpinus fangiana
Ciclev10016368m.g Citrus clementina
CiPaw.09G125700 Carya illinoinensis
ClCG01G024520 Citrullus lanatus
COL.COLO4_38289 Corchorus olitorius
Cpa.g.sc166.26 Carica papaya
Cre06.g300700 Chlamydomonas reinhardtii
Cre11.g467755 Chlamydomonas reinhardtii
Cre13.g575850 Chlamydomonas reinhardtii
CsaV3_6G051640 Cucumis sativus L.
Dinv30721 Davidia involucrata
ECA248G1055 Erigeron canadensis
EL10As10g23968 Beta vulgaris
Eucgr.E02392 Eucalyptus grandis
FAN11G2054 Fragaria x ananassa
FAN16G2406 Fragaria x ananassa
FAN21G2466 Fragaria x ananassa
FAN25G0518 Fragaria x ananassa
FvH4_3g05850 Fragaria vesca
Glyma.05G129900 Glycine max
Glyma.08G084600 Glycine max
Gohir.A09G077900 Gossypium hirsutum
Gohir.D09G078100 Gossypium hirsutum
Gorai.006G093300 Gossypium raimondii
GSVIVG01021427001 Vitis vinifera
HanXRQChr01g0020421 Helianthus annuus
Haze_05572 Corylus avellana
Hma1.2p1_0137F.1_g062520 Hydrangea macrophylla
HPP92_023862 Vanilla planifolia
Hund21522 Selenicereus undatus
Lalb_Chr12g0208911 Lupinus albus
Lj4g0007804 Lotus japonicus
Lsat_1_v5_gn_0_45440 Lactuca sativa
Lsat_1_v5_gn_1_96821 Lactuca sativa
Manes.17G068500 Manihot esculenta
Mapoly0134s0004 Marchantia polymorpha
MBI07_g15283_MAGBIO Magnolia biondii
MBI07_g26372_MAGBIO Magnolia biondii
MCO04G537 Micromonas commoda
MCO06G201 Micromonas commoda
MCO09G634 Micromonas commoda
MCO09G797 Micromonas commoda
MCO13G614 Micromonas commoda
MCO15G071 Micromonas commoda
MD05G1286400 Malus domestica
MD05G1286500 Malus domestica
MD10G1264000 Malus domestica
Medtr4g115730 Medicago truncatula
MELO3C007143.2 Cucumis melo
Migut.M00924 Erythranthe guttata
MSTRG.7476 Avicennia marina
Nitab4.5_0001040g0080 Nicotiana tabacum
Nitab4.5_0001040g0110 Nicotiana tabacum
Nitab4.5_0001655g0160 Nicotiana tabacum
Nitab4.5_0001655g0200 Nicotiana tabacum
Nn3g20690 Nelumbo nucifera
Nn4g26542 Nelumbo nucifera
Oeu033099.1 Olea europaea
Oeu042441.1 Olea europaea
Os06g0360300 Oryza sativa ssp. japonica
Peaxi162Scf00796g00115 Petunia axillaris
PGR042G0533 Punica granatum
PGR042G2019 Punica granatum
PGR042G2452 Punica granatum
PGR042G3975 Punica granatum
PGSC0003DMG400008307 Solanum tuberosum
Phvul.002G194000 Phaseolus vulgaris
Potri.011G079600 Populus trichocarpa
Pp3c3_1020 Physcomitrium patens
Pp3c6_24470 Physcomitrium patens
PRCOL_00002297 Prasinoderma coloniale
PRCOL_00003783 Prasinoderma coloniale
Prupe.4G078400 Prunus persica
Prupe.4G078500 Prunus persica
Psat4g033760 Pisum sativum
PSO541G1667 Papaver somniferum
QL05p058950 Quercus lobata
RcHm_v2.0_Chr5g0013671 Rosa chinensis
RcHm_v2.0_Chr6g0254821 Rosa chinensis
Rhsim13G0194200 Rhododendron simsii
Sabra11G0068100 Salix brachista
Sabra11G0068400 Salix brachista
Sabra11G0070400 Salix brachista
Sabra11G0070500 Salix brachista
SalBow8G4219 Salvia bowleyana
Sc05g0006390 Simmondsia chinensis
Sed0026399 Sechium edule
SEGI_02127 Sequoiadendron giganteum
SEGI_27230 Sequoiadendron giganteum
SGA_v2.0_scaffold333G48999 Striga asiatica
SMO171G0077 Selaginella moellendorffii
SMO351G0062 Selaginella moellendorffii
SMO353G0360 Selaginella moellendorffii
Solyc02g070760.4 Solanum lycopersicum
Solyc02g070770.3 Solanum lycopersicum
Sopen02g019830 Solanum pennellii
Sopen02g019840 Solanum pennellii
Sp4g16730 Schrenkiella parvula
TAR627G0560 Trochodendron aralioides
THA.LOC104814289 Tarenaya hassleriana
Thecc.06G152800 Theobroma cacao
Thhalv10017025m.g Eutrema salsugineum
TPR.G8005 Trifolium pratense
TWI73G0942 Tripterygium wilfordii
unitig_899.g15137 Utricularia gibba
vmacro03379 Vaccinium macrocarpon
VMungo0251G3477 Vigna mungo
Zm00001eb038110 Zea mays

User provided reference genes

Program Settings