Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p21230 Brassica napus
A09p45940 Brassica napus
Aa31LG10G7880 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.989 Anthoceros agrestis
Actinidia07783 Actinidia chinensis
Actinidia21206 Actinidia chinensis
Ah.08g213380 Amaranthus hybridus
AL5G33630 Arabidopsis lyrata
Aqoxy1G00207 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.X8E93Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YB8ZH2 Arachis hypogaea
AT3G52860 Arabidopsis thaliana
ATR0582G023 Amborella trichopoda
Atru.chr11.2437 Acer truncatum
Atru.chr5.1135 Acer truncatum
AUR62008679 Chenopodium quinoa
AUR62025565 Chenopodium quinoa
BcaB01g00336 Brassica carinata
BcaB02g10173 Brassica carinata
BolC6t37256H Brassica oleracea
BolC8t50425H Brassica oleracea
BraA07t29810Z Brassica rapa
BraA09t40054Z Brassica rapa
C06p20730 Brassica napus
C08p28130 Brassica napus
CAN.G857.16 Capsicum annuum
CANSAT25G1565 Cannabis sativa
CARHR162730 Cardamine hirsuta
Carub.0005s1933 Capsella rubella
Ca_17681_v3 Cicer arietinum L.
Ca_29605_v3 Cicer arietinum L.
CBR_g10859 Chara braunii
Cc01_g20940 Coffea canephora
CDE05G2918 Ceratophyllum demersum
Cfa005902 Carpinus fangiana
Ciclev10022754m.g Citrus clementina
Ciclev10033890m.g Citrus clementina
CiPaw.07G110200 Carya illinoinensis
CiPaw.08G094600 Carya illinoinensis
ClCG10G010560 Citrullus lanatus
COL.COLO4_23333 Corchorus olitorius
Cpa.g.sc9.253 Carica papaya
CsaV3_4G000480 Cucumis sativus L.
CSS0004919 Camellia sinensis var. sinensis
DCAR_002842 Daucus carota
Dinv33060 Davidia involucrata
Dinv44016 Davidia involucrata
Duzib138G1099 Durio zibethinus
Duzib211G0575 Durio zibethinus
ECA236G0849 Erigeron canadensis
EL10Ac7g17526 Beta vulgaris
Eucgr.F02473 Eucalyptus grandis
FAN07G2516 Fragaria x ananassa
FAN15G2928 Fragaria x ananassa
FAN17G0623 Fragaria x ananassa
FAN20G1025 Fragaria x ananassa
FAN22G2041 Fragaria x ananassa
FAN27G2298 Fragaria x ananassa
FvH4_2g03920 Fragaria vesca
FvH4_4g11510 Fragaria vesca
FvH4_7g29690 Fragaria vesca
Glyma.05G185600 Glycine max
Glyma.08G143600 Glycine max
Gohir.A12G129900 Gossypium hirsutum
Gohir.D12G133700 Gossypium hirsutum
Gorai.008G144700 Gossypium raimondii
GSVIVG01028030001 Vitis vinifera
HanXRQChr06g0163691 Helianthus annuus
HanXRQChr06g0163731 Helianthus annuus
HanXRQChr10g0316901 Helianthus annuus
Haze_04950 Corylus avellana
Hma1.2p1_0276F.1_g111190 Hydrangea macrophylla
Hma1.2p1_0494F.1_g165230 Hydrangea macrophylla
Hma1.2p1_1986F.1_g310070 Hydrangea macrophylla
Hma1.2p1_2044F.1_g312372 Hydrangea macrophylla
HPP92_010681 Vanilla planifolia
Hund11156 Selenicereus undatus
Lalb_Chr03g0036381 Lupinus albus
Lj4g0006553 Lotus japonicus
Lsat_1_v5_gn_7_53001 Lactuca sativa
Lsat_1_v5_gn_8_164201 Lactuca sativa
Manes.01G220201 Manihot esculenta
Manes.05G061600 Manihot esculenta
Mapoly0162s0020 Marchantia polymorpha
MBI18_g24865_MAGBIO Magnolia biondii
MD05G1096300 Malus domestica
MD10G1102600 Malus domestica
Medtr8g092180 Medicago truncatula
MELO3C017987.2 Cucumis melo
Migut.D00146 Erythranthe guttata
MSTRG.21637 Avicennia marina
Nitab4.5_0000860g0030 Nicotiana tabacum
Nitab4.5_0002276g0010 Nicotiana tabacum
Nitab4.5_0008438g0020 Nicotiana tabacum
Nn3g21512 Nelumbo nucifera
Oeu024404.1 Olea europaea
Oeu054120.1 Olea europaea
Os05g0154900 Oryza sativa ssp. japonica
Peaxi162Scf00045g01343 Petunia axillaris
Peaxi162Scf00445g00079 Petunia axillaris
PGR119G1363 Punica granatum
PGSC0003DMG400004469 Solanum tuberosum
PGSC0003DMG400018921 Solanum tuberosum
Phvul.002G266700 Phaseolus vulgaris
Potri.014G127900 Populus trichocarpa
Pp3c14_5880 Physcomitrium patens
Prupe.8G140700 Prunus persica
Psat7g049640 Pisum sativum
PSO675G2222 Papaver somniferum
PSO675G2923 Papaver somniferum
QL12p028306 Quercus lobata
RcHm_v2.0_Chr4g0408421 Rosa chinensis
RcHm_v2.0_Chr6g0252941 Rosa chinensis
RcHm_v2.0_Chr6g0252971 Rosa chinensis
RcHm_v2.0_Chr6g0264541 Rosa chinensis
Rhsim06G0059700 Rhododendron simsii
Rhsim09G0186400 Rhododendron simsii
Sabra14G0095000 Salix brachista
Sc04g0009560 Simmondsia chinensis
Sed0024679 Sechium edule
SEGI_14448 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00359 Striga asiatica
SMO367G0046 Selaginella moellendorffii
Solyc08g005920.3 Solanum lycopersicum
Solyc08g074670.3 Solanum lycopersicum
Sopen08g001890 Solanum pennellii
Sopen08g023260 Solanum pennellii
Sp5g09480 Schrenkiella parvula
TAR636G0282 Trochodendron aralioides
THA.LOC104817488 Tarenaya hassleriana
Thecc.01G301700 Theobroma cacao
Thhalv10010784m.g Eutrema salsugineum
TPR.G2165 Trifolium pratense
TWI14G0435 Tripterygium wilfordii
TWI59G1340 Tripterygium wilfordii
unitig_26.g10174 Utricularia gibba
vmacro09952 Vaccinium macrocarpon
Zm00001eb085090 Zea mays
Zm00001eb340530 Zea mays
Zm00001eb346090 Zea mays

User provided reference genes

Program Settings