Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p16600 Brassica napus
Aa31sc23G420 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.577 Anthoceros agrestis
Actinidia34411 Actinidia chinensis
Ah.15g097620 Amaranthus hybridus
Ah.15g097630 Amaranthus hybridus
AL8G35870 Arabidopsis lyrata
Aqoxy1G00926 Aquilegia oxysepala
Aqoxy1G00927 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3F7RX4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9NI65Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T6ZDSA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XH3YCC Arachis hypogaea
AT5G59400 Arabidopsis thaliana
ATR0559G091 Amborella trichopoda
Atru.chr3.3946 Acer truncatum
AUR62001772 Chenopodium quinoa
AUR62009560 Chenopodium quinoa
BcaB08g36261 Brassica carinata
BcaC04g19778 Brassica carinata
BolC3t13825H Brassica oleracea
BolC9t58042H Brassica oleracea
BraA10t43744Z Brassica rapa
C03p13750 Brassica napus
C09p51810 Brassica napus
CAN.G394.63 Capsicum annuum
CANSAT54G1668 Cannabis sativa
CARHR285770 Cardamine hirsuta
Carub.0008s2007 Capsella rubella
Ca_01319_v3 Cicer arietinum L.
Ca_19148_v3 Cicer arietinum L.
Cc01_g13010 Coffea canephora
CDE04G2637 Ceratophyllum demersum
CDE09G1090 Ceratophyllum demersum
Cfa011517 Carpinus fangiana
Ciclev10028946m.g Citrus clementina
CiPaw.13G092700 Carya illinoinensis
ClCG03G001420 Citrullus lanatus
COL.COLO4_18527 Corchorus olitorius
COL.COLO4_35627 Corchorus olitorius
Cpa.g.sc81.131 Carica papaya
CsaV3_1G034350 Cucumis sativus L.
CSS0026048 Camellia sinensis var. sinensis
DCAR_005353 Daucus carota
Dinv04178 Davidia involucrata
Dinv17019 Davidia involucrata
Dinv42967 Davidia involucrata
Dinv43132 Davidia involucrata
Duzib168G1171 Durio zibethinus
Duzib170G0057 Durio zibethinus
ECA236G0569 Erigeron canadensis
EL10Ac7g16033 Beta vulgaris
Eucgr.B02353 Eucalyptus grandis
FAN11G0832 Fragaria x ananassa
FAN16G3284 Fragaria x ananassa
FAN21G3395 Fragaria x ananassa
FAN25G3546 Fragaria x ananassa
FvH4_3g36480 Fragaria vesca
Glyma.11G138967 Glycine max
Glyma.12G062600 Glycine max
Glyma.13G336800 Glycine max
Glyma.15G037500 Glycine max
Gohir.A07G098900 Gossypium hirsutum
Gohir.D07G103400 Gossypium hirsutum
Gorai.001G111300 Gossypium raimondii
GSVIVG01024939001 Vitis vinifera
HanXRQChr05g0135061 Helianthus annuus
HanXRQChr06g0178811 Helianthus annuus
HanXRQChr10g0291051 Helianthus annuus
HanXRQChr10g0291061 Helianthus annuus
Haze_24114 Corylus avellana
HPP92_009462 Vanilla planifolia
Hund04946 Selenicereus undatus
Hund18899 Selenicereus undatus
Lalb_Chr01g0003631 Lupinus albus
Lj1A150T42 Lonicera japonica
Lj3g0017515 Lotus japonicus
Lsat_1_v5_gn_8_73500 Lactuca sativa
Manes.02G131500 Manihot esculenta
Mapoly0050s0097 Marchantia polymorpha
MCO07G449 Micromonas commoda
MD03G1090200 Malus domestica
MD11G1099800 Malus domestica
Medtr2g097230 Medicago truncatula
Medtr4g064030 Medicago truncatula
MELO3C020623.2 Cucumis melo
Migut.D02083 Erythranthe guttata
Nitab4.5_0000463g0210 Nicotiana tabacum
Nitab4.5_0001326g0170 Nicotiana tabacum
Nn2g13370 Nelumbo nucifera
Oeu002422.1 Olea europaea
Oeu017397.1 Olea europaea
Os05g0110800 Oryza sativa ssp. japonica
Peaxi162Scf00774g00121 Petunia axillaris
PGR102G1676 Punica granatum
PGSC0003DMG401030323 Solanum tuberosum
PGSC0003DMG402030323 Solanum tuberosum
Phvul.005G077000 Phaseolus vulgaris
Phvul.011G063700 Phaseolus vulgaris
Phvul.L006243 Phaseolus vulgaris
Potri.001G241400 Populus trichocarpa
Potri.009G032300 Populus trichocarpa
Pp3c14_5400 Physcomitrium patens
Pp3c1_24530 Physcomitrium patens
Prupe.6G074400 Prunus persica
Psat4g229040 Pisum sativum
Psat5g007960 Pisum sativum
Psat5g286680 Pisum sativum
PSO063G3487 Papaver somniferum
PSO339G5422 Papaver somniferum
QL01p031522 Quercus lobata
RcHm_v2.0_Chr5g0065341 Rosa chinensis
Rhsim01G0229400 Rhododendron simsii
Sabra09G0022900 Salix brachista
Sabra16G0145900 Salix brachista
SalBow3G1488 Salvia bowleyana
Sc21g0005860 Simmondsia chinensis
Sed0025445 Sechium edule
SEGI_38540 Sequoiadendron giganteum
SGA_v2.0_scaffold203G41535 Striga asiatica
SGA_v2.0_scaffold203G41537 Striga asiatica
Solyc06g076250.4 Solanum lycopersicum
Sopen06g032680 Solanum pennellii
Sp6g21080 Schrenkiella parvula
TAR633G2200 Trochodendron aralioides
TAR636G2897 Trochodendron aralioides
THA.LOC104810774 Tarenaya hassleriana
Thecc.09G320000 Theobroma cacao
Thhalv10014435m.g Eutrema salsugineum
TPR.G1035 Trifolium pratense
TPR.G27554 Trifolium pratense
TPR.G27777 Trifolium pratense
TPR.G34263 Trifolium pratense
TPR.G3768 Trifolium pratense
TWI79G0937 Tripterygium wilfordii
unitig_747.g22036 Utricularia gibba
unitig_747.g22037 Utricularia gibba
vmacro14541 Vaccinium macrocarpon
VMungo1127G0766 Vigna mungo
Zm00001eb355820 Zea mays

User provided reference genes

Program Settings