Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p12540 Brassica napus
Aa31LG7G1090 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1621 Anthoceros agrestis
Actinidia07362 Actinidia chinensis
Actinidia12783 Actinidia chinensis
Ah.01g020370 Amaranthus hybridus
AL1G28710 Arabidopsis lyrata
AL6G51060 Arabidopsis lyrata
AL6G51080 Arabidopsis lyrata
Aqoxy1G01551_Aqoxy1G01552 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.49XUJ3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K3W397 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QVJL9E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YWNN2V Arachis hypogaea
AT1G16540 Arabidopsis thaliana
ATR0763G170 Amborella trichopoda
Atru.chr1.140 Acer truncatum
Atru.chr1.169 Acer truncatum
Atru.chr1.178 Acer truncatum
AUR62011473 Chenopodium quinoa
AUR62016581 Chenopodium quinoa
BcaC05g25518 Brassica carinata
BolC5t30200H Brassica oleracea
BraA06t24417Z Brassica rapa
C05p14850 Brassica napus
CAN.G943.42 Capsicum annuum
CANSAT80G2640 Cannabis sativa
CARHR017020 Cardamine hirsuta
Carub.0001s1630 Capsella rubella
Ca_19805_v3 Cicer arietinum L.
CBR_g6363 Chara braunii
Cc05_g16200 Coffea canephora
CDE02G3212 Ceratophyllum demersum
Cfa026809 Carpinus fangiana
Ciclev10004324m.g Citrus clementina
CiPaw.11G065200 Carya illinoinensis
ClCG02G018530 Citrullus lanatus
COL.COLO4_36739 Corchorus olitorius
Cpa.g.c40903 Carica papaya
Cpa.g.sc67.56 Carica papaya
Cpa.g.sc67.58 Carica papaya
Cre02.g142351 Chlamydomonas reinhardtii
Cre03.g152000 Chlamydomonas reinhardtii
CsaV3_6G013680 Cucumis sativus L.
CSS0042223 Camellia sinensis var. sinensis
DCAR_009644 Daucus carota
Dinv19612 Davidia involucrata
Duzib213G0844 Durio zibethinus
Duzib268G1426 Durio zibethinus
ECA236G0150 Erigeron canadensis
EL10Ac9g21866 Beta vulgaris
Eucgr.F01464 Eucalyptus grandis
FAN11G3430 Fragaria x ananassa
FAN16G0636 Fragaria x ananassa
FAN21G1213 Fragaria x ananassa
FAN25G2633 Fragaria x ananassa
FvH4_3g15600 Fragaria vesca
Glyma.09G002300 Glycine max
Gohir.A01G039700 Gossypium hirsutum
Gohir.D01G027500 Gossypium hirsutum
Gohir.D13G084840 Gossypium hirsutum
Gorai.001G058000 Gossypium raimondii
Gorai.002G036800 Gossypium raimondii
Gorai.013G051600 Gossypium raimondii
GSVIVG01020355001 Vitis vinifera
HanXRQChr11g0335011 Helianthus annuus
Haze_08574 Corylus avellana
Haze_08576 Corylus avellana
Haze_08578 Corylus avellana
Hma1.2p1_0637F.1_g193450 Hydrangea macrophylla
Hma1.2p1_0637F.1_g193460 Hydrangea macrophylla
HPP92_026356 Vanilla planifolia
Hund20074 Selenicereus undatus
Lalb_Chr01g0008201 Lupinus albus
Lj3g0019331 Lotus japonicus
Lj8A189G27 Lonicera japonica
Lj8A189G28 Lonicera japonica
Lj8A189G30 Lonicera japonica
Lsat_1_v5_gn_7_111601 Lactuca sativa
Manes.06G173000 Manihot esculenta
Mapoly0055s0057 Marchantia polymorpha
MCO10G344 Micromonas commoda
MD00G1130400 Malus domestica
MD05G1221200 Malus domestica
Medtr4g030930 Medicago truncatula
MELO3C019659.2 Cucumis melo
Migut.M01548 Erythranthe guttata
Nitab4.5_0001080g0010 Nicotiana tabacum
Nitab4.5_0002321g0070 Nicotiana tabacum
Nitab4.5_0002321g0080 Nicotiana tabacum
Nn7g37998 Nelumbo nucifera
Nn7g37999 Nelumbo nucifera
Oeu036617.1 Olea europaea
Os06g0670000 Oryza sativa ssp. japonica
Peaxi162Scf00452g00721 Petunia axillaris
PGR102G1747 Punica granatum
PGSC0003DMG400022125 Solanum tuberosum
Phvul.011G216100 Phaseolus vulgaris
Potri.007G066400 Populus trichocarpa
Pp3c5_23340 Physcomitrium patens
PRCOL_00000624 Prasinoderma coloniale
Prupe.4G138400 Prunus persica
Psat7g228480 Pisum sativum
PSO675G0724 Papaver somniferum
PSO675G2460 Papaver somniferum
QL04p076801 Quercus lobata
RcHm_v2.0_Chr5g0026221 Rosa chinensis
Rhsim06G0239800 Rhododendron simsii
Sabra07G0053300 Salix brachista
SalBow1G2829 Salvia bowleyana
SalBow2G0599 Salvia bowleyana
SalBow8G2468 Salvia bowleyana
SalBow8G5394 Salvia bowleyana
Sc20g0003070 Simmondsia chinensis
Sed0015468 Sechium edule
Sed0020819 Sechium edule
SEGI_18652 Sequoiadendron giganteum
SEGI_23870 Sequoiadendron giganteum
SEGI_28347 Sequoiadendron giganteum
SGA_v2.0_scaffold186G40210 Striga asiatica
SHI21417 Sapria himalayana
SHI21420 Sapria himalayana
SHI21422 Sapria himalayana
SHI21431 Sapria himalayana
SMO144G0105 Selaginella moellendorffii
Solyc07g066480.3 Solanum lycopersicum
Sopen07g034660 Solanum pennellii
Sp1g14710 Schrenkiella parvula
TAR626G0611 Trochodendron aralioides
THA.LOC104812356 Tarenaya hassleriana
Thecc.07G149800 Theobroma cacao
Thhalv10006808m.g Eutrema salsugineum
TPR.G34170 Trifolium pratense
TWI39G0192 Tripterygium wilfordii
unitig_748.g7633 Utricularia gibba
unitig_748.g7634 Utricularia gibba
vmacro11674 Vaccinium macrocarpon
VMungo1127G0204 Vigna mungo
Zm00001eb274240 Zea mays
Zm00001eb389990 Zea mays

User provided reference genes

Program Settings