Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p37030 Brassica napus
Aa31LG4G10370 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.5149 Anthoceros agrestis
Actinidia08140 Actinidia chinensis
Actinidia27803 Actinidia chinensis
Ah.03g133110 Amaranthus hybridus
AL2G30010 Arabidopsis lyrata
AL3G40260 Arabidopsis lyrata
Aqoxy5G03784 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9TCE4B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RINP63 Arachis hypogaea
AT1G70590 Arabidopsis thaliana
ATR0686G177 Amborella trichopoda
Atru.chr11.2113 Acer truncatum
Atru.chr11.2128 Acer truncatum
AUR62005449 Chenopodium quinoa
AUR62024292 Chenopodium quinoa
BcaB03g14825 Brassica carinata
BolC6t39523H Brassica oleracea
BraA07t31265Z Brassica rapa
C06p44590 Brassica napus
CAN.G227.3 Capsicum annuum
CAN.G227.4 Capsicum annuum
CAN.G282.54 Capsicum annuum
CANSAT01G1386 Cannabis sativa
CARHR063810 Cardamine hirsuta
Carub.0002s1732 Capsella rubella
Ca_04576_v3 Cicer arietinum L.
CBR_g41529 Chara braunii
Cc11_g15600 Coffea canephora
CDE04G1163 Ceratophyllum demersum
CDE07G1825 Ceratophyllum demersum
Cfa009203 Carpinus fangiana
Ciclev10032010m.g Citrus clementina
CiPaw.05G183100 Carya illinoinensis
ClCG08G017720 Citrullus lanatus
COL.COLO4_24251 Corchorus olitorius
Cpa.g.sc33.9 Carica papaya
CsaV3_2G024910 Cucumis sativus L.
CSS0002796 Camellia sinensis var. sinensis
DCAR_024434 Daucus carota
Dinv15239 Davidia involucrata
Duzib251G0682 Durio zibethinus
ECA233G4095 Erigeron canadensis
EL10Ac6g13796 Beta vulgaris
Eucgr.H02509 Eucalyptus grandis
FAN07G0404 Fragaria x ananassa
FAN08G0615 Fragaria x ananassa
FAN12G3651 Fragaria x ananassa
FAN13G0137 Fragaria x ananassa
FAN17G0814 Fragaria x ananassa
FAN18G0478 Fragaria x ananassa
FAN22G0693 Fragaria x ananassa
FvH4_4g25470 Fragaria vesca
FvH4_5g38910 Fragaria vesca
Glyma.01G026500 Glycine max
Glyma.02G038300 Glycine max
Gohir.A01G159300 Gossypium hirsutum
Gohir.A05G312700 Gossypium hirsutum
Gohir.D01G151000 Gossypium hirsutum
Gohir.D05G314200 Gossypium hirsutum
Gorai.002G187200 Gossypium raimondii
Gorai.009G335800 Gossypium raimondii
GSVIVG01004082001 Vitis vinifera
HanXRQChr08g0208111 Helianthus annuus
Haze_12240 Corylus avellana
Hma1.2p1_0870F.1_g230930 Hydrangea macrophylla
HPP92_021381 Vanilla planifolia
Hund25385 Selenicereus undatus
Lalb_Chr09g0326141 Lupinus albus
Lalb_Chr16g0381971 Lupinus albus
Lj2g0004338 Lotus japonicus
Lj3A1057T77 Lonicera japonica
Lsat_1_v5_gn_8_150780 Lactuca sativa
Manes.12G023900 Manihot esculenta
Manes.13G025400 Manihot esculenta
MBI10_g03014_MAGBIO Magnolia biondii
MD13G1102600 Malus domestica
Medtr5g033210 Medicago truncatula
MELO3C010688.2 Cucumis melo
Migut.E00197 Erythranthe guttata
Migut.L01484 Erythranthe guttata
MSTRG.2420 Avicennia marina
MSTRG.7922 Avicennia marina
Nitab4.5_0000069g0320 Nicotiana tabacum
Nitab4.5_0000740g0060 Nicotiana tabacum
Nitab4.5_0002631g0010 Nicotiana tabacum
Nitab4.5_0004301g0010 Nicotiana tabacum
Nn4g22635 Nelumbo nucifera
Oeu001711.1 Olea europaea
Os04g0476000 Oryza sativa ssp. japonica
Peaxi162Scf00128g00005 Petunia axillaris
PGR119G1276 Punica granatum
PGSC0003DMG400016374 Solanum tuberosum
PGSC0003DMG400018621 Solanum tuberosum
Phvul.002G150600 Phaseolus vulgaris
Potri.008G187200 Populus trichocarpa
Potri.010G045300 Populus trichocarpa
Pp3c16_22820 Physcomitrium patens
Prupe.1G243200 Prunus persica
Psat2g092560 Pisum sativum
PSO832G1925 Papaver somniferum
QL03p058434 Quercus lobata
RcHm_v2.0_Chr1g0318701 Rosa chinensis
RcHm_v2.0_Chr4g0432791 Rosa chinensis
RcHm_v2.0_Chr4g0436601 Rosa chinensis
RcHm_v2.0_Chr7g0240871 Rosa chinensis
Rhsim12G0040900 Rhododendron simsii
Sabra10G0023000 Salix brachista
SalBow2G2235 Salvia bowleyana
Sc14g0008720 Simmondsia chinensis
Sed0020021 Sechium edule
SEGI_41390 Sequoiadendron giganteum
SGA_v2.0_scaffold87G27081 Striga asiatica
SHI17740 Sapria himalayana
SMO334G0079 Selaginella moellendorffii
Solyc01g007930.4 Solanum lycopersicum
Solyc05g013410.3 Solanum lycopersicum
Sopen01g003470 Solanum pennellii
Sopen05g008220 Solanum pennellii
Sp5g25750 Schrenkiella parvula
TAR314G0002 Trochodendron aralioides
TAR314G0004 Trochodendron aralioides
TAR371G0328 Trochodendron aralioides
TAR371G0549 Trochodendron aralioides
TAR629G0589 Trochodendron aralioides
TAR629G3419 Trochodendron aralioides
TAR633G0170 Trochodendron aralioides
TAR633G1814 Trochodendron aralioides
THA.LOC104822162 Tarenaya hassleriana
Thecc.02G258400 Theobroma cacao
Thhalv10018848m.g Eutrema salsugineum
TPR.G38771 Trifolium pratense
TPR.G38818 Trifolium pratense
TWI36G0572 Tripterygium wilfordii
unitig_21.g20870 Utricularia gibba
unitig_744.g24291 Utricularia gibba
vmacro01128 Vaccinium macrocarpon
VMungo1215G1754 Vigna mungo
Zm00001eb344380 Zea mays

User provided reference genes

Program Settings