Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p24260 Brassica napus
Aa31LG1G21750 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1380 Anthoceros agrestis
Actinidia33394 Actinidia chinensis
Ah.08g211610 Amaranthus hybridus
AL5G24810 Arabidopsis lyrata
AL5G24820 Arabidopsis lyrata
AL6G12730 Arabidopsis lyrata
Aqoxy2G01759 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2UY3HI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3ZC2I8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FR68MS Arachis hypogaea
AT3G46100 Arabidopsis thaliana
AT5G03406 Arabidopsis thaliana
ATR1132G102 Amborella trichopoda
Atru.chr8.1802 Acer truncatum
AUR62014241 Chenopodium quinoa
AUR62038498 Chenopodium quinoa
AUR62038499 Chenopodium quinoa
BcaC01g00217 Brassica carinata
BcaNung05574 Brassica carinata
BolC3t19955H Brassica oleracea
BolC4t25744H Brassica oleracea
BraA08t34381Z Brassica rapa
C03p77020 Brassica napus
C04p41650 Brassica napus
CAN.G1425.24 Capsicum annuum
CAN.G869.5 Capsicum annuum
CANSAT80G1523 Cannabis sativa
CARHR209940 Cardamine hirsuta
Carub.0005s1195 Capsella rubella
Ca_08861_v3 Cicer arietinum L.
CBR_g45330 Chara braunii
Cc06_g19340 Coffea canephora
CDE10G0836 Ceratophyllum demersum
Cfa017616 Carpinus fangiana
Ciclev10013364m.g Citrus clementina
Ciclev10013900m.g Citrus clementina
CiPaw.09G172100 Carya illinoinensis
ClCG04G009400 Citrullus lanatus
Cpa.g.c35476 Carica papaya
Cpa.g.sc738.3 Carica papaya
CsaV3_6G039980 Cucumis sativus L.
CSS0000486 Camellia sinensis var. sinensis
CSS0030493 Camellia sinensis var. sinensis
CSS0037103 Camellia sinensis var. sinensis
CSS0041575 Camellia sinensis var. sinensis
CSS0047787 Camellia sinensis var. sinensis
DCAR_017682 Daucus carota
Dinv03347 Davidia involucrata
Dinv29103 Davidia involucrata
Duzib093G0272 Durio zibethinus
ECA238G1020 Erigeron canadensis
ECA238G4771 Erigeron canadensis
EL10Ac7g16635 Beta vulgaris
Eucgr.K02931 Eucalyptus grandis
FAN11G0495 Fragaria x ananassa
FAN16G2384 Fragaria x ananassa
FAN21G2931 Fragaria x ananassa
FAN25G0236 Fragaria x ananassa
FvH4_3g29130 Fragaria vesca
Glyma.03G183400 Glycine max
Gohir.A01G141700 Gossypium hirsutum
Gohir.D01G130500 Gossypium hirsutum
Gorai.002G161900 Gossypium raimondii
GSVIVG01025735001 Vitis vinifera
HanXRQChr14g0454441 Helianthus annuus
Haze_20541 Corylus avellana
HPP92_007174 Vanilla planifolia
HPP92_007175 Vanilla planifolia
Hund20359 Selenicereus undatus
Lalb_Chr01g0018691 Lupinus albus
Lj1g0010500 Lotus japonicus
Lj3C986G3 Lonicera japonica
Lsat_1_v5_gn_2_123940 Lactuca sativa
Manes.08G010700 Manihot esculenta
Manes.09G066100 Manihot esculenta
Manes.14G161100 Manihot esculenta
Mapoly0007s0136 Marchantia polymorpha
Mapoly0034s0025 Marchantia polymorpha
Mapoly0059s0001 Marchantia polymorpha
MCO02G110 Micromonas commoda
MCO12G364 Micromonas commoda
MD04G1093200 Malus domestica
MD12G1112900 Malus domestica
Medtr7g101940 Medicago truncatula
MELO3C024475.2 Cucumis melo
Migut.J01655 Erythranthe guttata
MSTRG.10790 Avicennia marina
Nitab4.5_0003433g0040 Nicotiana tabacum
Nitab4.5_0008233g0020 Nicotiana tabacum
Oeu022974.1 Olea europaea
Oeu062662.1 Olea europaea
Os02g0754700 Oryza sativa ssp. japonica
Peaxi162Scf00454g00414 Petunia axillaris
PGR142G0097 Punica granatum
PGSC0003DMG400005646 Solanum tuberosum
Phvul.001G179200 Phaseolus vulgaris
Potri.006G124400 Populus trichocarpa
Pp3c11_2260 Physcomitrium patens
Pp3c1_6360 Physcomitrium patens
Pp3c7_24050 Physcomitrium patens
PRCOL_00000347 Prasinoderma coloniale
PRCOL_00003807 Prasinoderma coloniale
Prupe.6G232000 Prunus persica
Psat3g042640 Pisum sativum
PSO017G6300 Papaver somniferum
PSO063G1591 Papaver somniferum
QL02p081940 Quercus lobata
QL06p020223 Quercus lobata
QL07p043246 Quercus lobata
QL07p043256 Quercus lobata
QL07p043263 Quercus lobata
QL07p043269 Quercus lobata
QL11p049748 Quercus lobata
QL93p0053_0479 Quercus lobata
RcHm_v2.0_Chr3g0470291 Rosa chinensis
Rhsim12G0137200 Rhododendron simsii
Sabra06G0098400 Salix brachista
SalBow6G0607 Salvia bowleyana
Sc20g0005470 Simmondsia chinensis
Sed0000088 Sechium edule
SEGI_19136 Sequoiadendron giganteum
SEGI_25418 Sequoiadendron giganteum
SEGI_35251 Sequoiadendron giganteum
SGA_v2.0_scaffold105G30289 Striga asiatica
SMO268G0040 Selaginella moellendorffii
Solyc03g119280.3 Solanum lycopersicum
Sopen03g038160 Solanum pennellii
Sp7g12050 Schrenkiella parvula
TAR633G1880 Trochodendron aralioides
THA.LOC104826914 Tarenaya hassleriana
Thecc.05G067100 Theobroma cacao
Thhalv10013386m.g Eutrema salsugineum
TPR.G32806 Trifolium pratense
TWI53G0628 Tripterygium wilfordii
unitig_899.g15642 Utricularia gibba
vmacro16401 Vaccinium macrocarpon
VMungo1383G0425 Vigna mungo
Zm00001eb122020 Zea mays

User provided reference genes

Program Settings