Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p34330 Brassica napus
Aa31LG8G2320 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1222 Anthoceros agrestis
Actinidia09909 Actinidia chinensis
Actinidia35236 Actinidia chinensis
AL3G27460 Arabidopsis lyrata
Aqoxy4G00583 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2X8QJZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7LX6SY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8TDA44 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H96BGA Arachis hypogaea
AT3G15110 Arabidopsis thaliana
ATR0602G229 Amborella trichopoda
Atru.chr2.2384 Acer truncatum
AUR62019491 Chenopodium quinoa
AUR62036145 Chenopodium quinoa
BcaB01g02390 Brassica carinata
BcaB06g29536 Brassica carinata
BolC1t04898H Brassica oleracea
BolC5t33896H Brassica oleracea
BolC9t59001H Brassica oleracea
BraA05t22254Z Brassica rapa
C01p49410 Brassica napus
C02p31450 Brassica napus
C05p52110 Brassica napus
C09p61630 Brassica napus
CAN.G1119.17 Capsicum annuum
CANSAT35G1219 Cannabis sativa
CARHR090070 Cardamine hirsuta
CARHR090080 Cardamine hirsuta
Carub.0003s1475 Capsella rubella
Ca_03534_v3 Cicer arietinum L.
Ca_30930_v3 Cicer arietinum L.
CBR_g28819 Chara braunii
Cc05_g11610 Coffea canephora
CDE10G1174 Ceratophyllum demersum
Cfa020622 Carpinus fangiana
Ciclev10009151m.g Citrus clementina
CiPaw.12G116900 Carya illinoinensis
ClCG05G009210 Citrullus lanatus
Cpa.g.sc80.11 Carica papaya
Cre03.g167400 Chlamydomonas reinhardtii
CsaV3_3G019570 Cucumis sativus L.
CSS0020446 Camellia sinensis var. sinensis
DCAR_019573 Daucus carota
Dinv14949 Davidia involucrata
Duzib213G0446 Durio zibethinus
ECA234G3266 Erigeron canadensis
EL10Ac1g01129 Beta vulgaris
EL10Ac4g08262 Beta vulgaris
EL10Ac5g11588 Beta vulgaris
Eucgr.F01178 Eucalyptus grandis
FAN11G1719 Fragaria x ananassa
FAN16G0161 Fragaria x ananassa
FAN21G1059 Fragaria x ananassa
FAN25G0011 Fragaria x ananassa
FvH4_3g19170 Fragaria vesca
Glyma.06G235100 Glycine max
Glyma.12G227200 Glycine max
Glyma.13G273100 Glycine max
Gohir.A01G060400 Gossypium hirsutum
Gohir.A11G286600 Gossypium hirsutum
Gohir.D01G046900 Gossypium hirsutum
Gohir.D11G306500 Gossypium hirsutum
Gorai.002G066400 Gossypium raimondii
Gorai.007G325500 Gossypium raimondii
GSVIVG01014263001 Vitis vinifera
HanXRQChr06g0176201 Helianthus annuus
HanXRQChr10g0302491 Helianthus annuus
Haze_09383 Corylus avellana
Hma1.2p1_0416F.1_g148475 Hydrangea macrophylla
HPP92_027387 Vanilla planifolia
Lalb_Chr03g0030791 Lupinus albus
Lalb_Chr03g0030801 Lupinus albus
Lalb_Chr25g0286191 Lupinus albus
Lj2g0011732 Lotus japonicus
Lj3g0015051 Lotus japonicus
Lj8A153T41 Lonicera japonica
Lsat_1_v5_gn_0_4360 Lactuca sativa
Lsat_1_v5_gn_4_180780 Lactuca sativa
Lsat_1_v5_gn_5_127421 Lactuca sativa
Lsat_1_v5_gn_5_140640 Lactuca sativa
Lsat_1_v5_gn_7_42380 Lactuca sativa
Manes.03G104600 Manihot esculenta
Mapoly0060s0103 Marchantia polymorpha
MBI07_g32542_MAGBIO Magnolia biondii
MCO01G315 Micromonas commoda
MD03G1235600 Malus domestica
MD11G1256600 Malus domestica
Medtr2g078540 Medicago truncatula
Medtr6g042030 Medicago truncatula
Migut.H01964 Erythranthe guttata
Migut.M00771 Erythranthe guttata
MSTRG.12890 Avicennia marina
MSTRG.15245 Avicennia marina
Nitab4.5_0001208g0170 Nicotiana tabacum
Nitab4.5_0005232g0030 Nicotiana tabacum
Nn1g06380 Nelumbo nucifera
Oeu051093.1 Olea europaea
Oeu051094.1 Olea europaea
Oeu055126.1 Olea europaea
Os02g0307800 Oryza sativa ssp. japonica
Peaxi162Scf00027g01311 Petunia axillaris
PGR083G2284 Punica granatum
PGSC0003DMG400021311 Solanum tuberosum
Phvul.010G112200 Phaseolus vulgaris
Potri.011G097800 Populus trichocarpa
Pp3c11_19700 Physcomitrium patens
PRCOL_00001575 Prasinoderma coloniale
Prupe.4G173400 Prunus persica
Psat1g075280 Pisum sativum
Psat5g241440 Pisum sativum
PSO541G1927 Papaver somniferum
PSO675G6755 Papaver somniferum
QL08p023594 Quercus lobata
RcHm_v2.0_Chr5g0032261 Rosa chinensis
Rhsim04G0023000 Rhododendron simsii
Sabra11G0091300 Salix brachista
SalBow8G0584 Salvia bowleyana
Sc16g0007310 Simmondsia chinensis
Sed0015039 Sechium edule
SGA_v2.0_scaffold70G23696 Striga asiatica
SGA_v2.0_scaffold73G24224 Striga asiatica
Solyc10g007120.4 Solanum lycopersicum
Sopen10g003020 Solanum pennellii
Sp3g13310 Schrenkiella parvula
TAR624G0745 Trochodendron aralioides
TAR629G0034 Trochodendron aralioides
THA.LOC104810456 Tarenaya hassleriana
Thecc.07G099400 Theobroma cacao
Thecc.07G099700 Theobroma cacao
Thhalv10021284m.g Eutrema salsugineum
TPR.G17538 Trifolium pratense
TPR.G19712 Trifolium pratense
TWI38G0185 Tripterygium wilfordii
unitig_85.g27411 Utricularia gibba
unitig_86.g29837 Utricularia gibba
vmacro09517 Vaccinium macrocarpon
VMungo0331G0725 Vigna mungo
Zm00001eb235270 Zea mays

User provided reference genes

Program Settings