Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p31010 Brassica napus
Actinidia25081 Actinidia chinensis
AL3G39310 Arabidopsis lyrata
AL8G20530 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.D09HZI Arachis hypogaea
AT3G24060 Arabidopsis thaliana
Atru.chr4.1803 Acer truncatum
BcaB04g20397 Brassica carinata
BolC1t03901H Brassica oleracea
BraA01t03227Z Brassica rapa
C01p39510 Brassica napus
CAN.G1745.2 Capsicum annuum
CAN.G706.30 Capsicum annuum
CANSAT78G1772 Cannabis sativa
CANSAT78G2053 Cannabis sativa
CARHR100160 Cardamine hirsuta
Carub.0003s2446 Capsella rubella
Cfa014874 Carpinus fangiana
Ciclev10006174m.g Citrus clementina
Ciclev10023262m.g Citrus clementina
CiPaw.01G204600 Carya illinoinensis
ClCG05G003630 Citrullus lanatus
COL.COLO4_05730 Corchorus olitorius
COL.COLO4_05731 Corchorus olitorius
COL.COLO4_05733 Corchorus olitorius
COL.COLO4_05734 Corchorus olitorius
COL.COLO4_05735 Corchorus olitorius
COL.COLO4_05736 Corchorus olitorius
COL.COLO4_05737 Corchorus olitorius
COL.COLO4_34091 Corchorus olitorius
COL.COLO4_34096 Corchorus olitorius
COL.COLO4_34097 Corchorus olitorius
Cpa.g.sc12.57 Carica papaya
Cpa.g.sc59.81 Carica papaya
Cpa.g.sc59.85 Carica papaya
CsaV3_2G012000 Cucumis sativus L.
CsaV3_3G011340 Cucumis sativus L.
CSS0041852 Camellia sinensis var. sinensis
Dinv38286 Davidia involucrata
Duzib151G1037 Durio zibethinus
Duzib212G0436 Durio zibethinus
Duzib212G0862 Durio zibethinus
EL10Ac3g06777 Beta vulgaris
Eucgr.H00103 Eucalyptus grandis
FAN07G2372 Fragaria x ananassa
FAN12G0934 Fragaria x ananassa
FAN17G1087 Fragaria x ananassa
FAN22G2342 Fragaria x ananassa
FvH4_4g05670 Fragaria vesca
Glyma.09G023500 Glycine max
Glyma.15G129600 Glycine max
Gohir.A05G316800 Gossypium hirsutum
Gohir.A09G053300 Gossypium hirsutum
Gohir.A09G053500 Gossypium hirsutum
Gohir.A10G120900 Gossypium hirsutum
Gohir.D05G318200 Gossypium hirsutum
Gohir.D09G053020 Gossypium hirsutum
Gohir.D09G053032 Gossypium hirsutum
Gohir.D10G145400 Gossypium hirsutum
Gorai.006G055200 Gossypium raimondii
Gorai.006G055400 Gossypium raimondii
Gorai.009G341000 Gossypium raimondii
Gorai.011G162600 Gossypium raimondii
GSVIVG01029041001 Vitis vinifera
HanXRQChr02g0059521 Helianthus annuus
HanXRQChr07g0185851 Helianthus annuus
Haze_11548 Corylus avellana
Hma1.2p1_0146F.1_g065570 Hydrangea macrophylla
Hma1.2p1_0170F.1_g075380 Hydrangea macrophylla
Hma1.2p1_0903F.1_g235070 Hydrangea macrophylla
Lalb_Chr15g0088741 Lupinus albus
Lsat_1_v5_gn_6_62741 Lactuca sativa
Manes.03G153100 Manihot esculenta
Manes.15G049100 Manihot esculenta
MD13G1228600 Malus domestica
MD16G1234100 Malus domestica
Medtr2g030080 Medicago truncatula
Medtr2g030100 Medicago truncatula
MELO3C006342.2 Cucumis melo
MELO3C023093.2 Cucumis melo
Migut.G00603 Erythranthe guttata
Migut.G00604 Erythranthe guttata
Migut.G00680 Erythranthe guttata
Migut.H02432 Erythranthe guttata
Migut.N00331 Erythranthe guttata
Nitab4.5_0000281g0030 Nicotiana tabacum
Nitab4.5_0003185g0070 Nicotiana tabacum
Nitab4.5_0008614g0010 Nicotiana tabacum
Oeu024845.1 Olea europaea
Oeu033089.1 Olea europaea
Oeu041168.1 Olea europaea
PGR083G1564 Punica granatum
PGSC0003DMG400016877 Solanum tuberosum
Phvul.006G128700 Phaseolus vulgaris
Potri.001G053100 Populus trichocarpa
Potri.001G053300 Populus trichocarpa
Potri.003G175200 Populus trichocarpa
Potri.003G201300 Populus trichocarpa
Prupe.1G058400 Prunus persica
Psat1g167840 Pisum sativum
QL05p063717 Quercus lobata
QL05p063758 Quercus lobata
QL06p023021 Quercus lobata
QL11p023894 Quercus lobata
QL12p006673 Quercus lobata
RcHm_v2.0_Chr4g0396551 Rosa chinensis
RcHm_v2.0_Chr4g0396841 Rosa chinensis
Rhsim03G0222400 Rhododendron simsii
Rhsim04G0228300 Rhododendron simsii
Rhsim06G0013100 Rhododendron simsii
Rhsim09G0045600 Rhododendron simsii
Sabra03G0128400 Salix brachista
SalBow2G0067 Salvia bowleyana
SalBow2G2503 Salvia bowleyana
SalBow3G0850 Salvia bowleyana
Sc13g0002820 Simmondsia chinensis
Sed0020493 Sechium edule
Sed0021677 Sechium edule
Sed0023963 Sechium edule
Sed0027066 Sechium edule
SGA_v2.0_scaffold2G00855 Striga asiatica
SGA_v2.0_scaffold57G20177 Striga asiatica
SHI00018 Sapria himalayana
Solyc09g091360.1 Solanum lycopersicum
Solyc12g098110.1 Solanum lycopersicum
Sopen12g021810 Solanum pennellii
Sopen12g032930 Solanum pennellii
Sp3g21900 Schrenkiella parvula
THA.LOC104807827 Tarenaya hassleriana
THA.LOC104821619 Tarenaya hassleriana
Thecc.04G212700 Theobroma cacao
Thecc.04G213100 Theobroma cacao
Thecc.04G213200 Theobroma cacao
Thecc.04G215700 Theobroma cacao
Thhalv10003022m.g Eutrema salsugineum
TPR.G26323 Trifolium pratense
TPR.G26356 Trifolium pratense
TWI73G0050 Tripterygium wilfordii
vmacro22822 Vaccinium macrocarpon
VMungo0540G1768 Vigna mungo

User provided reference genes

Program Settings