Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p09200 Brassica napus
A09p28640 Brassica napus
Aa31LG6G7470 Aethionema arabicum
Aa31LG9G11400 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.701 Anthoceros agrestis
Ah.07g198200 Amaranthus hybridus
Ah.07g198210 Amaranthus hybridus
AL1G47110 Arabidopsis lyrata
AL6G44650 Arabidopsis lyrata
Aqoxy7G00007 Aquilegia oxysepala
Aqoxy8s003 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BAML4E Arachis hypogaea
AT1G32810 Arabidopsis thaliana
AT4G10600 Arabidopsis thaliana
ATR0078G022 Amborella trichopoda
Atru.chr5.3405 Acer truncatum
Atru.chr5.3414 Acer truncatum
Atru.chr9.1859 Acer truncatum
AUR62007075 Chenopodium quinoa
AUR62019939 Chenopodium quinoa
BcaB01g02745 Brassica carinata
BcaB04g17977 Brassica carinata
BcaC04g21045 Brassica carinata
BcaC07g37610 Brassica carinata
BolC8t47971H Brassica oleracea
BolC9t56467H Brassica oleracea
BraA08t32921Z Brassica rapa
BraA09t38425Z Brassica rapa
C09p36300 Brassica napus
CAN.G567.102 Capsicum annuum
CANSAT21G2321 Cannabis sativa
CARHR032180 Cardamine hirsuta
CARHR256000 Cardamine hirsuta
Carub.0001s3113 Capsella rubella
Carub.0006s2937 Capsella rubella
Ca_09953_v3 Cicer arietinum L.
CBR_g32513 Chara braunii
Cc08_g16940 Coffea canephora
CDE02G2470 Ceratophyllum demersum
CDE11G1187 Ceratophyllum demersum
Cfa011902 Carpinus fangiana
Ciclev10018587m.g Citrus clementina
CiPaw.11G110500 Carya illinoinensis
ClCG08G001970 Citrullus lanatus
COL.COLO4_10822 Corchorus olitorius
Cpa.g.sc37.92 Carica papaya
CsaV3_6G002490 Cucumis sativus L.
CSS0028831 Camellia sinensis var. sinensis
DCAR_009582 Daucus carota
DCAR_019998 Daucus carota
Dinv12891 Davidia involucrata
Dinv18754 Davidia involucrata
Duzib068G1314 Durio zibethinus
Duzib205G0106 Durio zibethinus
ECA233G6131 Erigeron canadensis
EL10Ac5g12404 Beta vulgaris
Eucgr.D01670 Eucalyptus grandis
FAN08G3416 Fragaria x ananassa
FAN13G2865 Fragaria x ananassa
FAN18G4434 Fragaria x ananassa
FvH4_5g10620 Fragaria vesca
Glyma.10G172500 Glycine max
Glyma.20G217700 Glycine max
Gohir.A12G241300 Gossypium hirsutum
Gohir.D12G242600 Gossypium hirsutum
Gorai.008G259800 Gossypium raimondii
GSVIVG01019675001 Vitis vinifera
HanXRQChr07g0192271 Helianthus annuus
Haze_09196 Corylus avellana
HPP92_001576 Vanilla planifolia
HPP92_001577 Vanilla planifolia
Hund11337 Selenicereus undatus
Lalb_Chr21g0311581 Lupinus albus
Lalb_Chr21g0311601 Lupinus albus
Lj2A154T41 Lonicera japonica
Lj2A154T42 Lonicera japonica
Lj5g0003487 Lotus japonicus
Lsat_1_v5_gn_6_11441 Lactuca sativa
Manes.01G055600 Manihot esculenta
Mapoly0057s0069 Marchantia polymorpha
Mapoly0057s0072 Marchantia polymorpha
MBI12_g14812_MAGBIO Magnolia biondii
MD06G1121800 Malus domestica
Medtr1g077940 Medicago truncatula
MELO3C025037.2 Cucumis melo
Migut.E00727 Erythranthe guttata
MSTRG.13701 Avicennia marina
Nitab4.5_0002520g0100 Nicotiana tabacum
Nitab4.5_0003419g0090 Nicotiana tabacum
Nn7g38300 Nelumbo nucifera
Oeu010728.1 Olea europaea
Os04g0221600 Oryza sativa ssp. japonica
Peaxi162Scf00074g00151 Petunia axillaris
PGR031G0320 Punica granatum
PGSC0003DMG401012227 Solanum tuberosum
PGSC0003DMG402012227 Solanum tuberosum
Phvul.L004801 Phaseolus vulgaris
Potri.001G448900 Populus trichocarpa
Potri.011G152600 Populus trichocarpa
Pp3c25_5890 Physcomitrium patens
Prupe.5G132500 Prunus persica
Psat6g052720 Pisum sativum
PSO063G2765 Papaver somniferum
PSO782G1858 Papaver somniferum
QL02p027371 Quercus lobata
RcHm_v2.0_Chr7g0187521 Rosa chinensis
Rhsim07G0076500 Rhododendron simsii
Sabra11G0148100 Salix brachista
Sabra11G0148200 Salix brachista
Sabra16G0303000 Salix brachista
Sc01g0010800 Simmondsia chinensis
Sed0006250 Sechium edule
SEGI_18929 Sequoiadendron giganteum
SEGI_29779 Sequoiadendron giganteum
SGA_v2.0_scaffold88G27243 Striga asiatica
SHI06919 Sapria himalayana
SMO367G0450 Selaginella moellendorffii
Solyc08g083290.4 Solanum lycopersicum
Sopen08g031500 Solanum pennellii
Sp1g28160 Schrenkiella parvula
Sp6g06850 Schrenkiella parvula
TAR374G0151 Trochodendron aralioides
TAR374G0328 Trochodendron aralioides
TAR374G0493 Trochodendron aralioides
TAR374G0755 Trochodendron aralioides
TAR636G1325 Trochodendron aralioides
TAR636G2842 Trochodendron aralioides
TAR636G2935 Trochodendron aralioides
THA.LOC104806458 Tarenaya hassleriana
THA.LOC104813063 Tarenaya hassleriana
Thecc.03G218200 Theobroma cacao
Thhalv10006636m.g Eutrema salsugineum
Thhalv10029370m.g Eutrema salsugineum
TPR.G31171 Trifolium pratense
TPR.G34808 Trifolium pratense
TPR.G34809 Trifolium pratense
TWI81G0285 Tripterygium wilfordii
unitig_699.g19549 Utricularia gibba
vmacro13840 Vaccinium macrocarpon
VMungo0720G0206 Vigna mungo
Zm00001eb086720 Zea mays

User provided reference genes

Program Settings