Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p59360 Brassica napus
A03p59580 Brassica napus
A06p18470 Brassica napus
A08p11040 Brassica napus
A09p38220 Brassica napus
Aa31LG6G12020 Aethionema arabicum
Ah.02g124440 Amaranthus hybridus
AL1G44970 Arabidopsis lyrata
AL7G22260 Arabidopsis lyrata
AL7G23530 Arabidopsis lyrata
AL7G23570 Arabidopsis lyrata
Aqoxy2G01436 Aquilegia oxysepala
Aqoxy7G03258 Aquilegia oxysepala
AT1G30800 Arabidopsis thaliana
AT4G12950 Arabidopsis thaliana
AT4G29980 Arabidopsis thaliana
Atru.chr10.659 Acer truncatum
AUR62007135 Chenopodium quinoa
AUR62008089 Chenopodium quinoa
AUR62008091 Chenopodium quinoa
AUR62008092 Chenopodium quinoa
AUR62028667 Chenopodium quinoa
AUR62028668 Chenopodium quinoa
BcaB01g00727 Brassica carinata
BcaB01g02128 Brassica carinata
BcaB04g18206 Brassica carinata
BcaC07g37806 Brassica carinata
BcaC07g39399 Brassica carinata
BcaC07g40588 Brassica carinata
BcaC09g50401 Brassica carinata
BcaNung00507 Brassica carinata
BolC7t46208H Brassica oleracea
BolC7t46226H Brassica oleracea
BolC8t48195H Brassica oleracea
BolC8t50049H Brassica oleracea
BraA03t14993Z Brassica rapa
BraA03t15014Z Brassica rapa
BraA06t24924Z Brassica rapa
BraA08t33095Z Brassica rapa
C07p57390 Brassica napus
C07p57610 Brassica napus
C08p24310 Brassica napus
C09p04090 Brassica napus
CAN.G84.20 Capsicum annuum
CANSAT35G1706 Cannabis sativa
CARHR030270 Cardamine hirsuta
CARHR237890 Cardamine hirsuta
CARHR238100 Cardamine hirsuta
Carub.0001s2910 Capsella rubella
Carub.0006s3088 Capsella rubella
Carub.0007s1066 Capsella rubella
Carub.0007s1174 Capsella rubella
Ca_02385_v3 Cicer arietinum L.
CDE04G0856 Ceratophyllum demersum
CDE04G2898 Ceratophyllum demersum
Cfa000754 Carpinus fangiana
Ciclev10017493m.g Citrus clementina
CiPaw.09G149100 Carya illinoinensis
COL.COLO4_26869 Corchorus olitorius
Cpa.g.sc159.25 Carica papaya
DCAR_001448 Daucus carota
DCAR_002955 Daucus carota
Duzib043G0004 Durio zibethinus
Duzib160G0446 Durio zibethinus
EL10Ac5g10610 Beta vulgaris
EL10Ac5g10640 Beta vulgaris
EL10Ac5g10674 Beta vulgaris
FAN03G0475 Fragaria x ananassa
FAN11G1050 Fragaria x ananassa
FAN11G2744 Fragaria x ananassa
FAN14G5542 Fragaria x ananassa
FAN16G1003 Fragaria x ananassa
FAN16G2918 Fragaria x ananassa
FAN18G0575 Fragaria x ananassa
FAN18G3875 Fragaria x ananassa
FAN21G0600 Fragaria x ananassa
FAN23G0143 Fragaria x ananassa
FAN25G0767 Fragaria x ananassa
FvH4_1g24910 Fragaria vesca
FvH4_3g11440 Fragaria vesca
FvH4_3g19970 Fragaria vesca
FvH4_5g18240 Fragaria vesca
FvH4_5g21920 Fragaria vesca
FvH4_6g29350 Fragaria vesca
Glyma.15G191500 Glycine max
Gohir.A02G088801 Gossypium hirsutum
Gohir.D02G104700 Gossypium hirsutum
Gorai.005G118900 Gossypium raimondii
HanXRQChr01g0020631 Helianthus annuus
Haze_05969 Corylus avellana
Hma1.2p1_0410F.1_g147050 Hydrangea macrophylla
Lalb_Chr11g0073251 Lupinus albus
Lj1P1155T48 Lonicera japonica
Lj6g0018842 Lotus japonicus
Lsat_1_v5_gn_1_91741 Lactuca sativa
Manes.03G066900 Manihot esculenta
Mapoly0033s0033 Marchantia polymorpha
Mapoly0095s0061 Marchantia polymorpha
MBI19_g30013_MAGBIO Magnolia biondii
MBI19_g33491_MAGBIO Magnolia biondii
MD00G1097400 Malus domestica
Medtr2g047120 Medicago truncatula
Migut.M01932 Erythranthe guttata
Nitab4.5_0004015g0040 Nicotiana tabacum
Nitab4.5_0006659g0010 Nicotiana tabacum
Nn8g39654 Nelumbo nucifera
Oeu000496.1 Olea europaea
Oeu063151.1 Olea europaea
PGSC0003DMG400025363 Solanum tuberosum
Phvul.009G218400 Phaseolus vulgaris
Potri.001G440800 Populus trichocarpa
Potri.011G155150 Populus trichocarpa
Pp3c6_3400 Physcomitrium patens
Prupe.4G102300 Prunus persica
Psat1g018720 Pisum sativum
PSO210G3101 Papaver somniferum
PSO782G2497 Papaver somniferum
QL05p063092 Quercus lobata
Rhsim13G0126500 Rhododendron simsii
Sabra16G0298100 Salix brachista
Sabra16G0300100 Salix brachista
Sc04g0008360 Simmondsia chinensis
Sc21g0002200 Simmondsia chinensis
Sc21g0002210 Simmondsia chinensis
SGA_v2.0_scaffold1G00298 Striga asiatica
SGA_v2.0_scaffold346G49537 Striga asiatica
SMO290G0002 Selaginella moellendorffii
Solyc11g072680.1 Solanum lycopersicum
Sopen11g030350 Solanum pennellii
Sp1g26680 Schrenkiella parvula
Sp7g27780 Schrenkiella parvula
Sp7g28070 Schrenkiella parvula
TAR636G0950 Trochodendron aralioides
THA.LOC104814335 Tarenaya hassleriana
Thecc.06G005400 Theobroma cacao
Thhalv10009325m.g Eutrema salsugineum
Thhalv10026388m.g Eutrema salsugineum
Thhalv10027213m.g Eutrema salsugineum
Thhalv10027436m.g Eutrema salsugineum
TPR.G22906 Trifolium pratense
TWI38G0231 Tripterygium wilfordii

User provided reference genes

Program Settings