Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p19650 Brassica napus
A09p55730 Brassica napus
Aa31sc229G10 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1912 Anthoceros agrestis
Actinidia14096 Actinidia chinensis
AL4G16610 Arabidopsis lyrata
Aqoxy7G03594 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2DG9CD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X3TF0E Arachis hypogaea
AT2G25280 Arabidopsis thaliana
ATR0767G069 Amborella trichopoda
Atru.chr7.2482 Acer truncatum
AUR62012434 Chenopodium quinoa
AUR62031558 Chenopodium quinoa
BcaB06g28051 Brassica carinata
BcaB08g35172 Brassica carinata
BcaC02g08359 Brassica carinata
BcaC07g40875 Brassica carinata
BolC4t27063H Brassica oleracea
BolC8t51443H Brassica oleracea
BraA04t17556Z Brassica rapa
BraA09t40974Z Brassica rapa
C04p55260 Brassica napus
C08p38730 Brassica napus
CAN.G75.9 Capsicum annuum
CANSAT25G3306 Cannabis sativa
CANSAT54G2335 Cannabis sativa
CARHR116260 Cardamine hirsuta
Carub.0004s0490 Capsella rubella
Ca_13036_v3 Cicer arietinum L.
CBR_g59364 Chara braunii
Cc08_g00340 Coffea canephora
CDE03G0272 Ceratophyllum demersum
Cfa013117 Carpinus fangiana
Cfa026845 Carpinus fangiana
Ciclev10009082m.g Citrus clementina
CiPaw.07G226000 Carya illinoinensis
ClCG08G013470 Citrullus lanatus
COL.COLO4_18897 Corchorus olitorius
Cpa.g.sc187.13 Carica papaya
Cre02.g096200 Chlamydomonas reinhardtii
CsaV3_2G032220 Cucumis sativus L.
CSS0019044 Camellia sinensis var. sinensis
DCAR_003104 Daucus carota
Dinv15871 Davidia involucrata
Dinv18189 Davidia involucrata
Duzib150G0083 Durio zibethinus
Duzib168G1909 Durio zibethinus
ECA248G3461 Erigeron canadensis
EL10Ac2g04167 Beta vulgaris
Eucgr.K02838 Eucalyptus grandis
FAN01G2683 Fragaria x ananassa
FAN02G2313 Fragaria x ananassa
FAN09G2129 Fragaria x ananassa
FAN15G2739 Fragaria x ananassa
FAN16G2296 Fragaria x ananassa
FAN20G2331 Fragaria x ananassa
FAN21G3387 Fragaria x ananassa
FAN24G2053 Fragaria x ananassa
FAN27G2423 Fragaria x ananassa
FAN28G2535 Fragaria x ananassa
FvH4_2g28610 Fragaria vesca
Glyma.14G113800 Glycine max
Gohir.A06G099500 Gossypium hirsutum
Gohir.D05G058700 Gossypium hirsutum
Gohir.D06G101700 Gossypium hirsutum
Gorai.009G059800 Gossypium raimondii
Gorai.010G116600 Gossypium raimondii
GSVIVG01035939001 Vitis vinifera
HanXRQChr13g0387991 Helianthus annuus
Haze_21481 Corylus avellana
Haze_26290 Corylus avellana
Hma1.2p1_0974F.1_g243070 Hydrangea macrophylla
HPP92_000481 Vanilla planifolia
Hund04483 Selenicereus undatus
Lalb_Chr11g0063641 Lupinus albus
Lalb_Chr23g0268401 Lupinus albus
Lj5g0012746 Lotus japonicus
Lj8A726G39 Lonicera japonica
Lsat_1_v5_gn_5_157921 Lactuca sativa
Manes.16G125000 Manihot esculenta
Mapoly0065s0048 Marchantia polymorpha
MBI11_g47760_MAGBIO Magnolia biondii
MBI12_g19406_MAGBIO Magnolia biondii
MBI15_g25765_MAGBIO Magnolia biondii
MBI15_g36826_MAGBIO Magnolia biondii
MCO07G667 Micromonas commoda
MD08G1152600 Malus domestica
MD15G1129200 Malus domestica
Medtr1g012830 Medicago truncatula
MELO3C011274.2 Cucumis melo
Migut.A00016 Erythranthe guttata
MSTRG.26021 Avicennia marina
Nitab4.5_0007718g0040 Nicotiana tabacum
Nitab4.5_0014723g0010 Nicotiana tabacum
Nn2g12192 Nelumbo nucifera
Oeu012278.1 Olea europaea
Oeu012280.1 Olea europaea
Os05g0310750 Oryza sativa ssp. japonica
Os08g0299000 Oryza sativa ssp. japonica
Peaxi162Scf00935g00015 Petunia axillaris
PGR119G2552 Punica granatum
Phvul.001G049700 Phaseolus vulgaris
Potri.006G258200 Populus trichocarpa
Potri.018G023700 Populus trichocarpa
Pp3c14_17280 Physcomitrium patens
Pp3c2_14390 Physcomitrium patens
PRCOL_00000176 Prasinoderma coloniale
Prupe.1G484800 Prunus persica
Prupe.1G567700 Prunus persica
Psat6g028000 Pisum sativum
PSO210G4598 Papaver somniferum
QL02p020871 Quercus lobata
RcHm_v2.0_Chr6g0297381 Rosa chinensis
Rhsim07G0160700 Rhododendron simsii
Rhsim12G0212900 Rhododendron simsii
Sabra06G0201900 Salix brachista
Sabra18G0026400 Salix brachista
SalBow4G1212 Salvia bowleyana
Sc09g0010330 Simmondsia chinensis
Sed0006243 Sechium edule
Sed0010362 Sechium edule
SEGI_02513 Sequoiadendron giganteum
SEGI_34683 Sequoiadendron giganteum
SGA_v2.0_scaffold20G09092 Striga asiatica
SMO358G0334 Selaginella moellendorffii
Solyc08g029110.3 Solanum lycopersicum
Sopen08g010000 Solanum pennellii
Sp4g04430 Schrenkiella parvula
TAR383G1021 Trochodendron aralioides
THA.LOC104805589 Tarenaya hassleriana
THA.LOC104815027 Tarenaya hassleriana
THA.LOC104815144 Tarenaya hassleriana
Thecc.09G020800 Theobroma cacao
Thhalv10000272m.g Eutrema salsugineum
TPR.G14021 Trifolium pratense
TWI34G1484 Tripterygium wilfordii
unitig_32.g10881 Utricularia gibba
vmacro05161 Vaccinium macrocarpon
VMungo0647G0032 Vigna mungo
Zm00001eb362830 Zea mays

User provided reference genes

Program Settings