Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p07230 Brassica napus
Aa31sc95G70 Aethionema arabicum
Actinidia39427 Actinidia chinensis
Ah.08g214630 Amaranthus hybridus
AL3G40820 Arabidopsis lyrata
Aqoxy2G03972 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.K8JSLF Arachis hypogaea
AT3G25130 Arabidopsis thaliana
ATR0561G108 Amborella trichopoda
Atru.chr6.1429 Acer truncatum
AUR62001135 Chenopodium quinoa
AUR62016544 Chenopodium quinoa
BcaB06g26721 Brassica carinata
BcaC06g35784 Brassica carinata
BolC7t41558H Brassica oleracea
BraA07t28509Z Brassica rapa
C07p10920 Brassica napus
CAN.G181.55 Capsicum annuum
CAN.G800.6 Capsicum annuum
CARHR101450 Cardamine hirsuta
Carub.0003s2546 Capsella rubella
Ca_03471_v3 Cicer arietinum L.
Cc01_g16680 Coffea canephora
Cfa010419 Carpinus fangiana
Ciclev10024373m.g Citrus clementina
CiPaw.13G049000 Carya illinoinensis
CiPaw.14G038800 Carya illinoinensis
ClCG07G002110 Citrullus lanatus
ClCG09G008640 Citrullus lanatus
COL.COLO4_08651 Corchorus olitorius
Cpa.g.sc34.103 Carica papaya
CSS0019537 Camellia sinensis var. sinensis
DCAR_004692 Daucus carota
DCAR_012672 Daucus carota
Dinv12644 Davidia involucrata
Dinv19167 Davidia involucrata
Duzib133G1381 Durio zibethinus
Duzib211G0292 Durio zibethinus
ECA247G2945 Erigeron canadensis
ECA248G2280 Erigeron canadensis
EL10Ac7g17913 Beta vulgaris
Eucgr.K02134 Eucalyptus grandis
FAN15G1498 Fragaria x ananassa
FAN24G0779 Fragaria x ananassa
FAN27G1148 Fragaria x ananassa
FvH4_2g18490 Fragaria vesca
Glyma.08G348101 Glycine max
Glyma.18G159700 Glycine max
Gohir.A07G092900 Gossypium hirsutum
Gohir.A07G161200 Gossypium hirsutum
Gohir.A11G139800 Gossypium hirsutum
Gohir.D07G097400 Gossypium hirsutum
Gohir.D07G164700 Gossypium hirsutum
Gohir.D11G145866 Gossypium hirsutum
Gorai.001G104900 Gossypium raimondii
Gorai.001G188400 Gossypium raimondii
Gorai.007G156400 Gossypium raimondii
HanXRQChr01g0015481 Helianthus annuus
HanXRQChr02g0051511 Helianthus annuus
HanXRQChr10g0279531 Helianthus annuus
Haze_03369 Corylus avellana
HPP92_009946 Vanilla planifolia
Lalb_Chr03g0041401 Lupinus albus
Lj1g0009273 Lotus japonicus
Lj5g0025661 Lotus japonicus
Lsat_1_v5_gn_9_14981 Lactuca sativa
Manes.12G047700 Manihot esculenta
Manes.13G049800 Manihot esculenta
MBI07_g27364_MAGBIO Magnolia biondii
MBI11_g07415_MAGBIO Magnolia biondii
MD05G1170600 Malus domestica
MD10G1158800 Malus domestica
Medtr7g055560 Medicago truncatula
Medtr7g055747 Medicago truncatula
MELO3C021078.2 Cucumis melo
MELO3C022719.2 Cucumis melo
Migut.D02505 Erythranthe guttata
MSTRG.18834 Avicennia marina
MSTRG.20970 Avicennia marina
Nitab4.5_0001161g0100 Nicotiana tabacum
Nitab4.5_0002641g0180 Nicotiana tabacum
Nitab4.5_0002985g0020 Nicotiana tabacum
Nitab4.5_0003020g0050 Nicotiana tabacum
Nitab4.5_0003656g0060 Nicotiana tabacum
Nitab4.5_0013864g0020 Nicotiana tabacum
Nn1g07983 Nelumbo nucifera
Nn3g20048 Nelumbo nucifera
Nn3g20049 Nelumbo nucifera
Oeu007785.1 Olea europaea
Oeu051530.1 Olea europaea
Os11g0458100 Oryza sativa ssp. japonica
Peaxi162Scf00068g00216 Petunia axillaris
Peaxi162Scf00372g00102 Petunia axillaris
Peaxi162Scf01312g00003 Petunia axillaris
PGR044G1095 Punica granatum
PGR083G2240 Punica granatum
PGSC0003DMG400017495 Solanum tuberosum
PGSC0003DMG400020102 Solanum tuberosum
PGSC0003DMG400022034 Solanum tuberosum
Phvul.008G132000 Phaseolus vulgaris
Potri.002G246400 Populus trichocarpa
Prupe.8G197900 Prunus persica
Psat3g149440 Pisum sativum
PSO017G4959 Papaver somniferum
PSO063G3464 Papaver somniferum
QL09p050923 Quercus lobata
QL09p051098 Quercus lobata
RcHm_v2.0_Chr6g0284001 Rosa chinensis
Rhsim01G0253400 Rhododendron simsii
Rhsim13G0048000 Rhododendron simsii
Sabra02G0187500 Salix brachista
SalBow5G5435 Salvia bowleyana
SalBow6G1220 Salvia bowleyana
SalBow6G2537 Salvia bowleyana
Sc05g0001930 Simmondsia chinensis
Sed0007907 Sechium edule
Sed0010610 Sechium edule
SGA_v2.0_scaffold156G37265 Striga asiatica
SGA_v2.0_scaffold3G01638 Striga asiatica
Solyc06g007790.1 Solanum lycopersicum
Solyc06g083330.2 Solanum lycopersicum
Solyc09g059550.1 Solanum lycopersicum
Sopen06g002670 Solanum pennellii
Sopen06g034710 Solanum pennellii
Sopen09g022730 Solanum pennellii
Sp3g22720 Schrenkiella parvula
TAR365G0760 Trochodendron aralioides
TAR636G0419 Trochodendron aralioides
THA.LOC104804626 Tarenaya hassleriana
Thecc.01G219200 Theobroma cacao
TPR.G6388 Trifolium pratense
TPR.G976 Trifolium pratense
TWI18G1450 Tripterygium wilfordii
TWI75G1481 Tripterygium wilfordii
unitig_26.g9437 Utricularia gibba
unitig_749.g13592 Utricularia gibba
unitig_899.g15407 Utricularia gibba
vmacro02785 Vaccinium macrocarpon
vmacro14737 Vaccinium macrocarpon
VMungo1383G0191 Vigna mungo
Zm00001eb090480 Zea mays

User provided reference genes

Program Settings