Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p08100 Brassica napus
Aa31LG1G3270 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.455 Anthoceros agrestis
Actinidia11830 Actinidia chinensis
Actinidia24044 Actinidia chinensis
Actinidia26760 Actinidia chinensis
Actinidia26959 Actinidia chinensis
Actinidia26960 Actinidia chinensis
Ah.14g088510 Amaranthus hybridus
AL1G22590 Arabidopsis lyrata
Aqoxy1G03830 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.QZ9QK3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XK38U2 Arachis hypogaea
AT1G11480 Arabidopsis thaliana
ATR0804G077 Amborella trichopoda
Atru.chr10.2047 Acer truncatum
Atru.chr10.2048 Acer truncatum
Atru.chr6.3115 Acer truncatum
Atru.chr6.3116 Acer truncatum
AUR62012574 Chenopodium quinoa
AUR62014626 Chenopodium quinoa
BcaC05g25024 Brassica carinata
BcaNung07116 Brassica carinata
BolC5t29709H Brassica oleracea
BraA06t24009Z Brassica rapa
C05p09680 Brassica napus
CAN.G466.8 Capsicum annuum
CANSAT35G0463 Cannabis sativa
CARHR011750 Cardamine hirsuta
Carub.0001s1109 Capsella rubella
Ca_18454_v3 Cicer arietinum L.
CBR_g36658 Chara braunii
Cc02_g11840 Coffea canephora
CDE01G0308 Ceratophyllum demersum
CDE12G0800 Ceratophyllum demersum
Cfa016400 Carpinus fangiana
Ciclev10014614m.g Citrus clementina
CiPaw.10G113100 Carya illinoinensis
CiPaw.10G113200 Carya illinoinensis
ClCG03G005190 Citrullus lanatus
COL.COLO4_33645 Corchorus olitorius
Cpa.g.sc81.1 Carica papaya
Cpa.g.sc81.2 Carica papaya
CsaV3_1G011380 Cucumis sativus L.
CSS0017238 Camellia sinensis var. sinensis
DCAR_004174 Daucus carota
DCAR_008109 Daucus carota
Dinv18952 Davidia involucrata
Duzib192G0995 Durio zibethinus
Duzib235G0390 Durio zibethinus
ECA236G3644 Erigeron canadensis
EL10As6g23684 Beta vulgaris
Eucgr.E03596 Eucalyptus grandis
FAN25G1204 Fragaria x ananassa
FvH4_3g03030 Fragaria vesca
Glyma.07G187300 Glycine max
Glyma.08G061800 Glycine max
Gohir.A09G070200 Gossypium hirsutum
Gohir.A10G017200 Gossypium hirsutum
Gohir.D09G070300 Gossypium hirsutum
Gohir.D10G017400 Gossypium hirsutum
Gorai.006G084700 Gossypium raimondii
Gorai.011G019300 Gossypium raimondii
GSVIVG01006401001 Vitis vinifera
GSVIVG01006635001 Vitis vinifera
GSVIVG01030650001 Vitis vinifera
HanXRQChr15g0482771 Helianthus annuus
HanXRQChr15g0482781 Helianthus annuus
Haze_06667 Corylus avellana
Haze_06671 Corylus avellana
Hma1.2p1_0809F.1_g221760 Hydrangea macrophylla
Hma1.2p1_0809F.1_g221770 Hydrangea macrophylla
HPP92_000870 Vanilla planifolia
Hund23539 Selenicereus undatus
Lalb_Chr09g0327161 Lupinus albus
Lalb_Chr16g0383301 Lupinus albus
Lj1A1221T57 Lonicera japonica
Lj2A276T57 Lonicera japonica
Lj4g0002185 Lotus japonicus
Lsat_1_v5_gn_7_18380 Lactuca sativa
Manes.17G030300 Manihot esculenta
Mapoly0113s0049 Marchantia polymorpha
MBI02_g26225_MAGBIO Magnolia biondii
MD05G1335400 Malus domestica
MD10G1310800 Malus domestica
Medtr4g092050 Medicago truncatula
MELO3C002515.2 Cucumis melo
Migut.M01258 Erythranthe guttata
MSTRG.15953 Avicennia marina
Nitab4.5_0000503g0080 Nicotiana tabacum
Nitab4.5_0006456g0010 Nicotiana tabacum
Nn1g06923 Nelumbo nucifera
Nn5g30945 Nelumbo nucifera
Oeu016146.1 Olea europaea
Oeu050499.1 Olea europaea
Oeu050809.4 Olea europaea
Os07g0546100 Oryza sativa ssp. japonica
Peaxi162Scf00759g00211 Petunia axillaris
PGR042G2399 Punica granatum
PGSC0003DMG400021722 Solanum tuberosum
Phvul.002G218900 Phaseolus vulgaris
Potri.007G119200 Populus trichocarpa
Potri.011G031900 Populus trichocarpa
Potri.017G041300 Populus trichocarpa
Pp3c20_3440 Physcomitrium patens
Prupe.4G030000 Prunus persica
Psat0s935g0040 Pisum sativum
PSO541G2946 Papaver somniferum
PSO675G2591 Papaver somniferum
QL05p012359 Quercus lobata
QL05p077347 Quercus lobata
RcHm_v2.0_Chr5g0004671 Rosa chinensis
RcHm_v2.0_Chr5g0004681 Rosa chinensis
Rhsim02G0115600 Rhododendron simsii
Sabra07G0096100 Salix brachista
Sabra11G0019200 Salix brachista
Sabra11G0025100 Salix brachista
Sabra17G0028000 Salix brachista
SalBow8G4343 Salvia bowleyana
Sc17g0006920 Simmondsia chinensis
Sed0006411 Sechium edule
SEGI_29006 Sequoiadendron giganteum
SGA_v2.0_scaffold7G03896 Striga asiatica
SMO118G0050 Selaginella moellendorffii
Solyc02g079880.3 Solanum lycopersicum
Sopen02g024640 Solanum pennellii
Sp1g10100 Schrenkiella parvula
TAR624G1144 Trochodendron aralioides
TAR626G0140 Trochodendron aralioides
TAR627G0295 Trochodendron aralioides
THA.LOC104809524 Tarenaya hassleriana
THA.LOC104818924 Tarenaya hassleriana
Thecc.06G207400 Theobroma cacao
Thhalv10007161m.g Eutrema salsugineum
TPR.G13934 Trifolium pratense
TWI38G0167 Tripterygium wilfordii
TWI63G1109 Tripterygium wilfordii
vmacro15844 Vaccinium macrocarpon
VMungo0251G1750 Vigna mungo
Zm00001eb106500 Zea mays
Zm00001eb323520 Zea mays

User provided reference genes

Program Settings