Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p07780 Brassica napus
A08p24350 Brassica napus
Aa31LG9G3050 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3605 Anthoceros agrestis
Actinidia20821 Actinidia chinensis
Ah.13g072600 Amaranthus hybridus
AL7G41950 Arabidopsis lyrata
Aqoxy5G00183 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.HQEG75 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NA4LRU Arachis hypogaea
AT4G14310 Arabidopsis thaliana
ATR0736G089 Amborella trichopoda
Atru.chr4.2004 Acer truncatum
AUR62002164 Chenopodium quinoa
AUR62015544 Chenopodium quinoa
BcaC01g00205 Brassica carinata
BcaC02g09333 Brassica carinata
BcaNung06103 Brassica carinata
BolC3t19941H Brassica oleracea
BolC4t25724H Brassica oleracea
BolC4t25725H Brassica oleracea
BraA08t34390Z Brassica rapa
C03p76860 Brassica napus
C04p41430 Brassica napus
C04p41440 Brassica napus
CAN.G220.39 Capsicum annuum
CANSAT54G2691 Cannabis sativa
CARHR220500 Cardamine hirsuta
Carub.0007s2798 Capsella rubella
Ca_03010_v3 Cicer arietinum L.
CBR_g30942 Chara braunii
Cc03_g05790 Coffea canephora
CDE04G2551 Ceratophyllum demersum
CDE07G1006 Ceratophyllum demersum
Cfa014743 Carpinus fangiana
Ciclev10004264m.g Citrus clementina
CiPaw.01G181400 Carya illinoinensis
CiPaw.02G109300 Carya illinoinensis
CiPaw.06G041800 Carya illinoinensis
ClCG05G004200 Citrullus lanatus
COL.COLO4_15917 Corchorus olitorius
Cpa.g.sc44.32 Carica papaya
CsaV3_3G011930 Cucumis sativus L.
CSS0016984 Camellia sinensis var. sinensis
CSS0047984 Camellia sinensis var. sinensis
DCAR_024278 Daucus carota
Dinv27073 Davidia involucrata
Dinv29839 Davidia involucrata
Duzib151G0888 Durio zibethinus
Duzib212G0761 Durio zibethinus
ECA248G0134 Erigeron canadensis
EL10Ac3g04981 Beta vulgaris
Eucgr.H03018 Eucalyptus grandis
FAN12G0827 Fragaria x ananassa
FAN17G2537 Fragaria x ananassa
FAN22G0039 Fragaria x ananassa
FvH4_4g04020 Fragaria vesca
Glyma.02G003800 Glycine max
Glyma.10G004700 Glycine max
Gohir.A02G040500 Gossypium hirsutum
Gohir.D02G046500 Gossypium hirsutum
Gorai.005G051300 Gossypium raimondii
GSVIVG01027854001 Vitis vinifera
HanXRQChr01g0023201 Helianthus annuus
HanXRQChr11g0330791 Helianthus annuus
Haze_11418 Corylus avellana
Hma1.2p1_0112F.1_g054305 Hydrangea macrophylla
HPP92_008326 Vanilla planifolia
Hund03055 Selenicereus undatus
Hund11908 Selenicereus undatus
Lalb_Chr03g0037341 Lupinus albus
Lj3A679T38 Lonicera japonica
Lj3A684T25 Lonicera japonica
Lj6g0021221 Lotus japonicus
Lsat_1_v5_gn_1_74661 Lactuca sativa
Manes.15G043200 Manihot esculenta
Manes.15G043300 Manihot esculenta
Mapoly0063s0094 Marchantia polymorpha
MBI07_g31083_MAGBIO Magnolia biondii
MD13G1216600 Malus domestica
MD16G1222000 Malus domestica
Medtr1g041685 Medicago truncatula
MELO3C006406.2 Cucumis melo
Migut.G00502 Erythranthe guttata
Migut.N00286 Erythranthe guttata
MSTRG.21921 Avicennia marina
MSTRG.4147 Avicennia marina
Nitab4.5_0000044g0530 Nicotiana tabacum
Nitab4.5_0000596g0060 Nicotiana tabacum
Nn1g02867 Nelumbo nucifera
Oeu002940.1 Olea europaea
Oeu005084.1 Olea europaea
Os02g0809900 Oryza sativa ssp. japonica
Peaxi162Scf00392g00730 Petunia axillaris
PGR004G2334 Punica granatum
PGSC0003DMG400017212 Solanum tuberosum
Phvul.007G275400 Phaseolus vulgaris
Potri.008G169200 Populus trichocarpa
Potri.010G069200 Populus trichocarpa
Pp3c16_10130 Physcomitrium patens
Pp3c25_7300 Physcomitrium patens
Prupe.1G042300 Prunus persica
Psat6g104520 Pisum sativum
PSO210G0343 Papaver somniferum
PSO832G1937 Papaver somniferum
QL06p019224 Quercus lobata
RcHm_v2.0_Chr4g0394291 Rosa chinensis
Rhsim02G0041600 Rhododendron simsii
Rhsim02G0041700 Rhododendron simsii
Sabra08G0129000 Salix brachista
Sabra10G0037900 Salix brachista
SalBow1G6189 Salvia bowleyana
SalBow3G0714 Salvia bowleyana
SalBow7G4774 Salvia bowleyana
SalBow8G3468 Salvia bowleyana
SalBow8G3717 Salvia bowleyana
Sc19g0003230 Simmondsia chinensis
Sed0026902 Sechium edule
SEGI_14734 Sequoiadendron giganteum
SGA_v2.0_scaffold101G29731 Striga asiatica
SGA_v2.0_scaffold43G16217 Striga asiatica
SGA_v2.0_scaffold57G20265 Striga asiatica
Solyc09g090340.3 Solanum lycopersicum
Sopen09g033240 Solanum pennellii
Sp7g12340 Schrenkiella parvula
TAR362G0279 Trochodendron aralioides
TAR633G1608 Trochodendron aralioides
THA.LOC104804761 Tarenaya hassleriana
THA.LOC104822240 Tarenaya hassleriana
Thecc.04G259100 Theobroma cacao
Thhalv10024359m.g Eutrema salsugineum
TPR.G25189 Trifolium pratense
TPR.G25191 Trifolium pratense
TWI09G0385 Tripterygium wilfordii
TWI53G1583 Tripterygium wilfordii
unitig_736.g22443 Utricularia gibba
unitig_899.g14890 Utricularia gibba
vmacro15459 Vaccinium macrocarpon
VMungo0720G1073 Vigna mungo
Zm00001eb191660 Zea mays
Zm00001eb258510 Zea mays

User provided reference genes

Program Settings