Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p16540 Brassica napus
A09p09420 Brassica napus
Aa31LG1G15900 Aethionema arabicum
Actinidia21238 Actinidia chinensis
Actinidia32821 Actinidia chinensis
Ah.02g125610 Amaranthus hybridus
AL8G43980 Arabidopsis lyrata
Aqoxy6G02765 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.IRX7P6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UV71K9 Arachis hypogaea
AT5G67350 Arabidopsis thaliana
ATR0661G396 Amborella trichopoda
Atru.chr3.207 Acer truncatum
BcaB04g20064 Brassica carinata
BcaC04g19788 Brassica carinata
BcaC04g23209 Brassica carinata
BolC7t42952H Brassica oleracea
BolC9t53999H Brassica oleracea
BolC9t58026H Brassica oleracea
BraA07t29378Z Brassica rapa
BraA09t36591Z Brassica rapa
C09p11100 Brassica napus
C09p51650 Brassica napus
CAN.G1075.9 Capsicum annuum
CANSAT01G3084 Cannabis sativa
CARHR280260 Cardamine hirsuta
Carub.0008s2714 Capsella rubella
Cc07_g06740 Coffea canephora
CDE04G2817 Ceratophyllum demersum
Cfa004094 Carpinus fangiana
Ciclev10025829m.g Citrus clementina
CiPaw.01G007800 Carya illinoinensis
CiPaw.02G004700 Carya illinoinensis
ClCG01G017290 Citrullus lanatus
ClCG02G012410 Citrullus lanatus
Cpa.g.sc6.55 Carica papaya
CsaV3_2G016540 Cucumis sativus L.
CsaV3_6G043820 Cucumis sativus L.
CSS0012811 Camellia sinensis var. sinensis
DCAR_021471 Daucus carota
Dinv26896 Davidia involucrata
Dinv30062 Davidia involucrata
Duzib147G1232 Durio zibethinus
Duzib187G0216 Durio zibethinus
Duzib264G0474 Durio zibethinus
EL10Ac6g15663 Beta vulgaris
Eucgr.I00726 Eucalyptus grandis
FAN19G1545 Fragaria x ananassa
FAN23G2725 Fragaria x ananassa
FAN26G3453 Fragaria x ananassa
FAN28G2899 Fragaria x ananassa
FvH4_1g17130 Fragaria vesca
Glyma.01G191400 Glycine max
Glyma.05G103000 Glycine max
Glyma.11G050800 Glycine max
Glyma.17G164300 Glycine max
Gohir.A02G153500 Gossypium hirsutum
Gohir.A10G090300 Gossypium hirsutum
Gohir.A11G217700 Gossypium hirsutum
Gohir.A12G074500 Gossypium hirsutum
Gohir.D03G026900 Gossypium hirsutum
Gohir.D10G097800 Gossypium hirsutum
Gohir.D11G205800 Gossypium hirsutum
Gohir.D12G072700 Gossypium hirsutum
Gorai.003G028600 Gossypium raimondii
Gorai.007G220900 Gossypium raimondii
Gorai.008G080000 Gossypium raimondii
Gorai.011G107400 Gossypium raimondii
GSVIVG01000158001 Vitis vinifera
HanXRQChr11g0322471 Helianthus annuus
HanXRQChr12g0373231 Helianthus annuus
HanXRQChr12g0377191 Helianthus annuus
Haze_15320 Corylus avellana
HPP92_007853 Vanilla planifolia
Lalb_Chr16g0389101 Lupinus albus
Lj2g0008966 Lotus japonicus
Lj4g0004383 Lotus japonicus
Lsat_1_v5_gn_3_87740 Lactuca sativa
Lsat_1_v5_gn_4_162000 Lactuca sativa
Manes.12G112400 Manihot esculenta
Manes.13G114000 Manihot esculenta
MD02G1181700 Malus domestica
MD15G1292600 Malus domestica
Medtr4g095320 Medicago truncatula
MELO3C007607.2 Cucumis melo
MELO3C020864.2 Cucumis melo
Migut.H00374 Erythranthe guttata
MSTRG.23698 Avicennia marina
MSTRG.2839 Avicennia marina
MSTRG.3457 Avicennia marina
Nitab4.5_0000419g0140 Nicotiana tabacum
Nitab4.5_0003878g0070 Nicotiana tabacum
Nitab4.5_0005127g0030 Nicotiana tabacum
Nitab4.5_0005127g0050 Nicotiana tabacum
Nitab4.5_0007941g0010 Nicotiana tabacum
Nn1g04631 Nelumbo nucifera
Nn5g30501 Nelumbo nucifera
Nn5g30944 Nelumbo nucifera
Oeu040602.1 Olea europaea
Oeu054177.1 Olea europaea
Peaxi162Scf00264g00321 Petunia axillaris
Peaxi162Scf00365g00076 Petunia axillaris
PGR004G2820 Punica granatum
PGSC0003DMG400024943 Solanum tuberosum
Phvul.002G013600 Phaseolus vulgaris
Phvul.003G237500 Phaseolus vulgaris
Potri.005G145100 Populus trichocarpa
Potri.007G051800 Populus trichocarpa
Prupe.6G224800 Prunus persica
Psat4g083080 Pisum sativum
PSO541G0358 Papaver somniferum
PSO675G4008 Papaver somniferum
QL06p039956 Quercus lobata
RcHm_v2.0_Chr2g0107301 Rosa chinensis
Rhsim08G0096100 Rhododendron simsii
Sabra05G0114800 Salix brachista
Sabra05G0115900 Salix brachista
Sabra07G0045500 Salix brachista
SalBow1G5175 Salvia bowleyana
Sed0008783 Sechium edule
Sed0011473 Sechium edule
SGA_v2.0_scaffold143G35780 Striga asiatica
SGA_v2.0_scaffold15G07407 Striga asiatica
Solyc02g092720.1 Solanum lycopersicum
Solyc03g150114.1 Solanum lycopersicum
Sopen02g037270 Solanum pennellii
Sp2g29310 Schrenkiella parvula
TAR376G1145 Trochodendron aralioides
TAR628G1677 Trochodendron aralioides
THA.LOC104827519 Tarenaya hassleriana
Thecc.01G067900 Theobroma cacao
Thhalv10005384m.g Eutrema salsugineum
TPR.G23890 Trifolium pratense
TWI09G0600 Tripterygium wilfordii
TWI53G1118 Tripterygium wilfordii
unitig_52.g17607 Utricularia gibba
unitig_62.g23420 Utricularia gibba
unitig_899.g14576 Utricularia gibba
vmacro17985 Vaccinium macrocarpon
VMungo1011G0001 Vigna mungo
VMungo1215G1030 Vigna mungo

User provided reference genes

Program Settings