Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p42780 Brassica napus
Aa31LG5G15180 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2056 Anthoceros agrestis
Actinidia05774 Actinidia chinensis
Actinidia30938 Actinidia chinensis
Ah.06g192240 Amaranthus hybridus
AL3G14940 Arabidopsis lyrata
Aqoxy2G03453 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.XU8J57 Arachis hypogaea
AT3G04780 Arabidopsis thaliana
ATR0665G176 Amborella trichopoda
Atru.chr2.798 Acer truncatum
AUR62001024 Chenopodium quinoa
AUR62004927 Chenopodium quinoa
BcaB04g21347 Brassica carinata
BcaNung06422 Brassica carinata
BNapus_Darmor_BZH_scaffold_78p01010 Brassica napus
BolC1t05726H Brassica oleracea
BraA01t04505Z Brassica rapa
BraA05t22974Z Brassica rapa
C05p62500 Brassica napus
CAN.G134.109 Capsicum annuum
CAN.G141.8 Capsicum annuum
CANSAT54G1830 Cannabis sativa
CARHR079030 Cardamine hirsuta
Carub.0003s0395 Capsella rubella
Ca_10048_v3 Cicer arietinum L.
CBR_g8269 Chara braunii
Cc02_g31890 Coffea canephora
Cc02_g31920 Coffea canephora
CDE06G0313 Ceratophyllum demersum
CDE07G0028 Ceratophyllum demersum
Cfa006448 Carpinus fangiana
Cfa026782 Carpinus fangiana
Ciclev10002653m.g Citrus clementina
CiPaw.08G124800 Carya illinoinensis
ClCG02G016540 Citrullus lanatus
COL.COLO4_15309 Corchorus olitorius
Cre17.g730250 Chlamydomonas reinhardtii
CsaV3_2G004230 Cucumis sativus L.
CSS0036106 Camellia sinensis var. sinensis
DCAR_011698 Daucus carota
DCAR_011699 Daucus carota
DCAR_027617 Daucus carota
Dinv05370 Davidia involucrata
Dinv20864 Davidia involucrata
Duzib106G1152 Durio zibethinus
Duzib177G0905 Durio zibethinus
ECA232G3347 Erigeron canadensis
EL10Ac4g09116 Beta vulgaris
Eucgr.B02113 Eucalyptus grandis
FAN02G1200 Fragaria x ananassa
FAN05G1135 Fragaria x ananassa
FAN05G5291 Fragaria x ananassa
FAN09G2181 Fragaria x ananassa
FAN14G0649 Fragaria x ananassa
FvH4_6g03140 Fragaria vesca
Glyma.10G161600 Glycine max
Gohir.A11G253700 Gossypium hirsutum
Gohir.A13G170400 Gossypium hirsutum
Gohir.D11G263600 Gossypium hirsutum
Gohir.D13G175800 Gossypium hirsutum
Gorai.007G283600 Gossypium raimondii
Gorai.013G201200 Gossypium raimondii
GSVIVG01021827001 Vitis vinifera
HanXRQChr15g0493451 Helianthus annuus
Haze_04345 Corylus avellana
Haze_27143 Corylus avellana
Hma1.2p1_0332F.1_g127630 Hydrangea macrophylla
HPP92_015625 Vanilla planifolia
Hund06962 Selenicereus undatus
Lalb_Chr02g0148771 Lupinus albus
Lalb_Chr06g0168031 Lupinus albus
Lj5g0020047 Lotus japonicus
Lj7A489G21 Lonicera japonica
Lsat_1_v5_gn_4_137100 Lactuca sativa
Manes.08G133000 Manihot esculenta
Manes.09G153900 Manihot esculenta
Mapoly0034s0051 Marchantia polymorpha
MBI11_g35357_MAGBIO Magnolia biondii
MCO08G264 Micromonas commoda
MD04G1222600 Malus domestica
MD12G1238700 Malus domestica
Medtr1g080960 Medicago truncatula
MELO3C004371.2 Cucumis melo
Migut.N01905 Erythranthe guttata
Nitab4.5_0004469g0080 Nicotiana tabacum
Nitab4.5_0005582g0040 Nicotiana tabacum
Nn1g02427 Nelumbo nucifera
Nn6g34152 Nelumbo nucifera
Oeu027466.2 Olea europaea
Os03g0795500 Oryza sativa ssp. japonica
Peaxi162Scf00282g00219 Petunia axillaris
PGR083G0704 Punica granatum
PGSC0003DMG400011476 Solanum tuberosum
PGSC0003DMG400019449 Solanum tuberosum
Phvul.007G187000 Phaseolus vulgaris
Potri.005G052100 Populus trichocarpa
Potri.013G039500 Populus trichocarpa
Pp3c5_6010 Physcomitrium patens
Pp3c6_27050 Physcomitrium patens
PRCOL_00004155 Prasinoderma coloniale
Prupe.6G341600 Prunus persica
Psat6g146440 Pisum sativum
PSO210G2729 Papaver somniferum
PSO832G0823 Papaver somniferum
QL03p025001 Quercus lobata
QL03p025010 Quercus lobata
RcHm_v2.0_Chr3g0451391 Rosa chinensis
Rhsim10G0108600 Rhododendron simsii
Sabra05G0045800 Salix brachista
Sabra13G0036900 Salix brachista
SalBow8G2599 Salvia bowleyana
Sc09g0003870 Simmondsia chinensis
Sed0000415 Sechium edule
Sed0002619 Sechium edule
SEGI_41475 Sequoiadendron giganteum
SGA_v2.0_scaffold80G25907 Striga asiatica
SGA_v2.0_scaffold81G26087 Striga asiatica
SMO340G0197 Selaginella moellendorffii
Solyc01g097450.3 Solanum lycopersicum
Solyc04g010010.3 Solanum lycopersicum
Solyc04g010030.1 Solanum lycopersicum
Sopen01g041120 Solanum pennellii
Sopen04g005140 Solanum pennellii
Sopen04g005160 Solanum pennellii
Sp3g03620 Schrenkiella parvula
TAR362G0997 Trochodendron aralioides
TAR365G0414 Trochodendron aralioides
THA.LOC104818636 Tarenaya hassleriana
Thecc.05G286500 Theobroma cacao
Thhalv10021632m.g Eutrema salsugineum
TPR.G30942 Trifolium pratense
TPR.G32522 Trifolium pratense
TWI74G0584 Tripterygium wilfordii
TWI77G0725 Tripterygium wilfordii
unitig_21.g20052 Utricularia gibba
vmacro05240 Vaccinium macrocarpon
VMungo0720G0096 Vigna mungo
Zm00001eb060640 Zea mays
Zm00001eb213000 Zea mays

User provided reference genes

Program Settings