Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p10420 Brassica napus
Aa31LG3G9160 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1589 Anthoceros agrestis
Actinidia34175 Actinidia chinensis
Ah.07g206200 Amaranthus hybridus
AL8G27410 Arabidopsis lyrata
Aqoxy5G04046 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3F6PU2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.58WBAP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B3EP0P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E9FCC2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FE5R37 Arachis hypogaea
AT5G52910 Arabidopsis thaliana
ATR0721G161 Amborella trichopoda
Atru.BG.163.p Acer truncatum
Atru.chr1.311 Acer truncatum
Atru.chr1.314 Acer truncatum
AUR62021073 Chenopodium quinoa
AUR62031458 Chenopodium quinoa
BcaB08g35655 Brassica carinata
BcaC04g20520 Brassica carinata
BolC9t57141H Brassica oleracea
BraA10t43124Z Brassica rapa
C09p42650 Brassica napus
CAN.G108.2 Capsicum annuum
CANSAT21G0517 Cannabis sativa
CARHR265900 Cardamine hirsuta
Carub.0008s1311 Capsella rubella
Ca_10700_v3 Cicer arietinum L.
Cc02_g02120 Coffea canephora
CDE03G0155 Ceratophyllum demersum
CDE04G2330 Ceratophyllum demersum
Cfa000852 Carpinus fangiana
Cfa016337 Carpinus fangiana
Ciclev10004177m.g Citrus clementina
CiPaw.05G259500 Carya illinoinensis
ClCG01G000730 Citrullus lanatus
COL.COLO4_30250 Corchorus olitorius
Cpa.g.sc3.16 Carica papaya
Cre06.g284850 Chlamydomonas reinhardtii
CsaV3_5G000860 Cucumis sativus L.
CSS0002454 Camellia sinensis var. sinensis
CSS0023888 Camellia sinensis var. sinensis
DCAR_020293 Daucus carota
Dinv35292 Davidia involucrata
Duzib205G0693 Durio zibethinus
ECA246G1245 Erigeron canadensis
EL10Ac3g05372 Beta vulgaris
Eucgr.A02677 Eucalyptus grandis
FAN01G1802 Fragaria x ananassa
FAN03G3290 Fragaria x ananassa
FAN06G1858 Fragaria x ananassa
FAN06G3414 Fragaria x ananassa
FAN06G4050 Fragaria x ananassa
FAN06G5036 Fragaria x ananassa
FAN10G3192 Fragaria x ananassa
FvH4_7g30740 Fragaria vesca
FvH4_7g30961 Fragaria vesca
Glyma.03G109600 Glycine max
Glyma.10G227900 Glycine max
Glyma.10G228400 Glycine max
Glyma.14G176200 Glycine max
Glyma.20G164400 Glycine max
Gohir.A12G254700 Gossypium hirsutum
Gohir.D12G254600 Gossypium hirsutum
Gorai.008G272300 Gossypium raimondii
GSVIVG01028757001 Vitis vinifera
GSVIVG01028761001 Vitis vinifera
GSVIVG01028763001 Vitis vinifera
GSVIVG01028765001 Vitis vinifera
HanXRQChr01g0002611 Helianthus annuus
HanXRQChr05g0158761 Helianthus annuus
Haze_00088 Corylus avellana
Hma1.2p1_0142F.1_g064180 Hydrangea macrophylla
Hma1.2p1_0142F.1_g064190 Hydrangea macrophylla
HPP92_007648 Vanilla planifolia
Hund04816 Selenicereus undatus
Lalb_Chr06g0161421 Lupinus albus
Lj3C915G3 Lonicera japonica
Lj3C915T0 Lonicera japonica
Lj5g0007861 Lotus japonicus
Lsat_1_v5_gn_5_37621 Lactuca sativa
Lsat_1_v5_gn_7_7800 Lactuca sativa
Lsat_1_v5_gn_8_88601 Lactuca sativa
Manes.06G155000 Manihot esculenta
Mapoly0089s0007 Marchantia polymorpha
MBI06_g29320_MAGBIO Magnolia biondii
MD01G1212700 Malus domestica
Medtr1g099370 Medicago truncatula
MELO3C005855.2 Cucumis melo
Migut.F00258 Erythranthe guttata
MSTRG.27059 Avicennia marina
Nitab4.5_0001748g0020 Nicotiana tabacum
Nitab4.5_0002340g0020 Nicotiana tabacum
Nn1g01753 Nelumbo nucifera
Oeu037127.2 Olea europaea
Os05g0210500 Oryza sativa ssp. japonica
Peaxi162Scf00904g00467 Petunia axillaris
PGR042G3191 Punica granatum
PGSC0003DMG400006588 Solanum tuberosum
PGSC0003DMG400006589 Solanum tuberosum
Phvul.007G077600 Phaseolus vulgaris
Potri.015G024300 Populus trichocarpa
Pp3c8_21590 Physcomitrium patens
PRCOL_00002573 Prasinoderma coloniale
Prupe.2G304900 Prunus persica
Psat6g194880 Pisum sativum
PSO170G5128 Papaver somniferum
QL09p011755 Quercus lobata
QL09p011899 Quercus lobata
QL09p011903 Quercus lobata
QL09p011945 Quercus lobata
RcHm_v2.0_Chr1g0379691 Rosa chinensis
RcHm_v2.0_Chr5g0072581 Rosa chinensis
Rhsim03G0196700 Rhododendron simsii
Sabra15G0018800 Salix brachista
Sabra15G0021300 Salix brachista
SalBow4G2614 Salvia bowleyana
Sc13g0009410 Simmondsia chinensis
Sed0025455 Sechium edule
SEGI_11166 Sequoiadendron giganteum
SGA_v2.0_scaffold44G16767 Striga asiatica
SHI13741 Sapria himalayana
SHI13742 Sapria himalayana
SHI13743 Sapria himalayana
SMO171G0132 Selaginella moellendorffii
SMO353G0144 Selaginella moellendorffii
Solyc03g007800.3 Solanum lycopersicum
Sopen03g003730 Solanum pennellii
Sp6g15090 Schrenkiella parvula
TAR374G0725 Trochodendron aralioides
THA.LOC104811936 Tarenaya hassleriana
Thecc.03G189100 Theobroma cacao
Thhalv10012488m.g Eutrema salsugineum
TPR.G7748 Trifolium pratense
TWI14G1289 Tripterygium wilfordii
unitig_46.g18810 Utricularia gibba
vmacro06593 Vaccinium macrocarpon
VMungo0464G0969 Vigna mungo
VMungo0720G2624 Vigna mungo
Zm00001eb296310 Zea mays

User provided reference genes

Program Settings