Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p22380 Brassica napus
Aa31sc160G20 Aethionema arabicum
Aa31sc690G30 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2351 Anthoceros agrestis
Actinidia24666 Actinidia chinensis
Aqoxy1G02896 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.LX21RY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XBA78H Arachis hypogaea
AT5G16850 Arabidopsis thaliana
ATR0681G222 Amborella trichopoda
ATR0829G203 Amborella trichopoda
Atru.chr11.730 Acer truncatum
Atru.chr11.731 Acer truncatum
AUR62014136 Chenopodium quinoa
AUR62041247 Chenopodium quinoa
BcaC04g18840 Brassica carinata
BcaC04g18841 Brassica carinata
BolC3t19073H Brassica oleracea
BolC9t58856H Brassica oleracea
BraA10t44297Z Brassica rapa
C09p60230 Brassica napus
CAN.G1820.1 Capsicum annuum
CAN.G1820.3 Capsicum annuum
CANSAT78G1614 Cannabis sativa
CARHR196310 Cardamine hirsuta
Carub.0006s1507 Capsella rubella
Ca_14375_v3 Cicer arietinum L.
Ca_14376_v3 Cicer arietinum L.
CBR_g45710 Chara braunii
CBR_g45714 Chara braunii
CDE07G0235 Ceratophyllum demersum
CDE07G0311 Ceratophyllum demersum
CDE07G1503 Ceratophyllum demersum
Cfa008089 Carpinus fangiana
Cfa012743 Carpinus fangiana
Cfa026815 Carpinus fangiana
Ciclev10030541m.g Citrus clementina
CiPaw.13G004500 Carya illinoinensis
ClCG10G012430 Citrullus lanatus
COL.COLO4_04642 Corchorus olitorius
Cpa.g.sc245.13 Carica papaya
Cpa.g.sc245.15 Carica papaya
Cpa.g.sc245.16 Carica papaya
Cre04.g213652 Chlamydomonas reinhardtii
CsaV3_3G032200 Cucumis sativus L.
CSS0036458 Camellia sinensis var. sinensis
CSS0040942 Camellia sinensis var. sinensis
CSS0041236 Camellia sinensis var. sinensis
CSS0042886 Camellia sinensis var. sinensis
DCAR_005448 Daucus carota
DCAR_005449 Daucus carota
DCAR_024213 Daucus carota
DCAR_024214 Daucus carota
Dinv12038 Davidia involucrata
Dinv18440 Davidia involucrata
ECA234G1269 Erigeron canadensis
EL10Ac1g02254 Beta vulgaris
FAN03G2830 Fragaria x ananassa
FAN06G4072 Fragaria x ananassa
FAN10G2468 Fragaria x ananassa
FvH4_7g01000 Fragaria vesca
Glyma.08G155900 Glycine max
Glyma.15G274000 Glycine max
Gohir.A05G396700 Gossypium hirsutum
Gohir.D04G018600 Gossypium hirsutum
Gorai.012G022200 Gossypium raimondii
GSVIVG01032086001 Vitis vinifera
HanXRQChr12g0379891 Helianthus annuus
Hma1.2p1_0293F.1_g116170 Hydrangea macrophylla
Hma1.2p1_0293F.1_g116180 Hydrangea macrophylla
HPP92_011265 Vanilla planifolia
HPP92_011289 Vanilla planifolia
HPP92_011342 Vanilla planifolia
Hund24995 Selenicereus undatus
Lalb_Chr13g0291131 Lupinus albus
Lalb_Chr13g0291141 Lupinus albus
Lalb_Chr13g0291151 Lupinus albus
Lj3g0013961 Lotus japonicus
Lj7C570T8 Lonicera japonica
Lj7P570T32 Lonicera japonica
Lsat_1_v5_gn_3_2761 Lactuca sativa
Lsat_1_v5_gn_4_31580 Lactuca sativa
Manes.10G091300 Manihot esculenta
Mapoly0009s0015 Marchantia polymorpha
MBI03_g07304_MAGBIO Magnolia biondii
MCO03G604 Micromonas commoda
MD07G1010300 Malus domestica
MELO3C023972.2 Cucumis melo
Migut.B01025 Erythranthe guttata
Migut.B01303 Erythranthe guttata
Nitab4.5_0000634g0140 Nicotiana tabacum
Nitab4.5_0002179g0010 Nicotiana tabacum
Nitab4.5_0002179g0020 Nicotiana tabacum
Nitab4.5_0002179g0030 Nicotiana tabacum
Nitab4.5_0013258g0010 Nicotiana tabacum
Nn7g36191 Nelumbo nucifera
Oeu063172.1 Olea europaea
Os12g0293100 Oryza sativa ssp. japonica
Peaxi162Scf00428g00318 Petunia axillaris
PGR042G3169 Punica granatum
Phvul.005G021500 Phaseolus vulgaris
Potri.003G022600 Populus trichocarpa
Pp3c1_42700 Physcomitrium patens
Prupe.2G012600 Prunus persica
Psat5g193800 Pisum sativum
PSO339G2846 Papaver somniferum
PSO384G2197 Papaver somniferum
PSO384G3069 Papaver somniferum
QL02p026227 Quercus lobata
QL02p026296 Quercus lobata
QL05p050737 Quercus lobata
QL05p060653 Quercus lobata
QL11p003492 Quercus lobata
QL12p011919 Quercus lobata
RcHm_v2.0_Chr1g0315901 Rosa chinensis
Rhsim07G0055200 Rhododendron simsii
Sabra03G0014300 Salix brachista
Sc04g0005700 Simmondsia chinensis
Sed0006979 Sechium edule
SEGI_03843 Sequoiadendron giganteum
SEGI_09183 Sequoiadendron giganteum
SEGI_22370 Sequoiadendron giganteum
SEGI_30633 Sequoiadendron giganteum
SEGI_37340 Sequoiadendron giganteum
SGA_v2.0_scaffold119G32730 Striga asiatica
SHI19146 Sapria himalayana
SHI19147 Sapria himalayana
SHI19148 Sapria himalayana
Solyc01g087095.2 Solanum lycopersicum
Sopen01g034170 Solanum pennellii
Sp6g27270 Schrenkiella parvula
TAR633G2667 Trochodendron aralioides
Thecc.10G136000 Theobroma cacao
Thhalv10012498m.g Eutrema salsugineum
TPR.G30923 Trifolium pratense
TWI09G1525 Tripterygium wilfordii
unitig_0.g1385 Utricularia gibba
vmacro13662 Vaccinium macrocarpon
vmacro13663 Vaccinium macrocarpon
vmacro19894 Vaccinium macrocarpon
VMungo1080G1687 Vigna mungo

User provided reference genes

Program Settings