Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p18330 Brassica napus
Aa31LG5G8280 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.213 Anthoceros agrestis
Actinidia07231 Actinidia chinensis
Actinidia24196 Actinidia chinensis
Ah.08g215920 Amaranthus hybridus
AL4G22650 Arabidopsis lyrata
AL4G22670 Arabidopsis lyrata
Aqoxy4G02830 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.32614Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J9251A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XC3EXN Arachis hypogaea
AT2G27680 Arabidopsis thaliana
ATR0820G214 Amborella trichopoda
ATR0820G262 Amborella trichopoda
Atru.chr3.3331 Acer truncatum
AUR62009791 Chenopodium quinoa
AUR62039238 Chenopodium quinoa
BcaB02g10107 Brassica carinata
BcaC02g10896 Brassica carinata
BolC4t23888H Brassica oleracea
BraA07t29549Z Brassica rapa
C04p23950 Brassica napus
CAN.G644.5 Capsicum annuum
CANSAT11G1964 Cannabis sativa
CARHR120330 Cardamine hirsuta
CARHR120340 Cardamine hirsuta
CARHR120370 Cardamine hirsuta
Carub.0004s0839 Capsella rubella
Carub.0004s0841 Capsella rubella
Ca_01667_v3 Cicer arietinum L.
CBR_g10840 Chara braunii
CBR_g23540 Chara braunii
Cc01_g09510 Coffea canephora
CDE02G1304 Ceratophyllum demersum
CDE04G0325 Ceratophyllum demersum
Ciclev10028566m.g Citrus clementina
CiPaw.13G138700 Carya illinoinensis
ClCG02G022080 Citrullus lanatus
COL.COLO4_19934 Corchorus olitorius
Cpa.g.sc32.122 Carica papaya
Cre02.g095127 Chlamydomonas reinhardtii
Cre12.g518900 Chlamydomonas reinhardtii
Cre12.g544000 Chlamydomonas reinhardtii
Cre16.g684750 Chlamydomonas reinhardtii
CsaV3_6G014910 Cucumis sativus L.
CSS0010610 Camellia sinensis var. sinensis
CSS0035304 Camellia sinensis var. sinensis
DCAR_006148 Daucus carota
Dinv05174 Davidia involucrata
Dinv29445 Davidia involucrata
Duzib150G1562 Durio zibethinus
EL10Ac7g15794 Beta vulgaris
EL10Ac9g22616 Beta vulgaris
Eucgr.J00468 Eucalyptus grandis
FAN11G2232 Fragaria x ananassa
FAN16G3342 Fragaria x ananassa
FAN21G0773 Fragaria x ananassa
FAN25G3482 Fragaria x ananassa
FvH4_3g29620 Fragaria vesca
Glyma.12G183100 Glycine max
Glyma.13G318000 Glycine max
Gohir.A05G082400 Gossypium hirsutum
Gohir.D05G085300 Gossypium hirsutum
Gorai.009G087100 Gossypium raimondii
GSVIVG01034253001 Vitis vinifera
GSVIVG01036185001 Vitis vinifera
HanXRQChr14g0451701 Helianthus annuus
Haze_23423 Corylus avellana
Hma1.2p1_0305F.1_g119470 Hydrangea macrophylla
Hma1.2p1_0305F.1_g119500 Hydrangea macrophylla
HPP92_003276 Vanilla planifolia
Hund18739 Selenicereus undatus
Hund20869 Selenicereus undatus
Lalb_Chr14g0374111 Lupinus albus
Lalb_Chr24g0395241 Lupinus albus
Lj2A987T33 Lonicera japonica
Lj2C987T5 Lonicera japonica
Lj3g0002711 Lotus japonicus
Lsat_1_v5_gn_2_95901 Lactuca sativa
Manes.11G159800 Manihot esculenta
Mapoly0068s0097 Marchantia polymorpha
Mapoly0074s0037 Marchantia polymorpha
MBI01_g15449_MAGBIO Magnolia biondii
MBI17_g16880_MAGBIO Magnolia biondii
MCO12G490 Micromonas commoda
MD03G1139700 Malus domestica
MD11G1162100 Malus domestica
Medtr2g085125 Medicago truncatula
Medtr2g085135 Medicago truncatula
MELO3C008584.2 Cucumis melo
MELO3C014407.2 Cucumis melo
MELO3C021433.2 Cucumis melo
MELO3C030474.2 Cucumis melo
Migut.D02344 Erythranthe guttata
Nn6g34991 Nelumbo nucifera
Oeu050205.1 Olea europaea
Os09g0567366 Oryza sativa ssp. japonica
Peaxi162Scf00544g00917 Petunia axillaris
PGR119G0315 Punica granatum
PGSC0003DMG400007408 Solanum tuberosum
Phvul.005G125766 Phaseolus vulgaris
Potri.009G146000 Populus trichocarpa
Pp3c10_3150 Physcomitrium patens
Pp3c3_32330 Physcomitrium patens
Pp3c8_9920 Physcomitrium patens
PRCOL_00006822 Prasinoderma coloniale
Prupe.6G124700 Prunus persica
Psat5g256000 Pisum sativum
Psat5g256160 Pisum sativum
PSO339G4135 Papaver somniferum
PSO384G3475 Papaver somniferum
QL01p013222 Quercus lobata
RcHm_v2.0_Chr5g0054671 Rosa chinensis
RcHm_v2.0_Chr5g0054681 Rosa chinensis
RcHm_v2.0_Chr5g0054781 Rosa chinensis
RcHm_v2.0_Chr5g0054911 Rosa chinensis
Rhsim05G0023600 Rhododendron simsii
Rhsim05G0032600 Rhododendron simsii
Sabra09G0112900 Salix brachista
Sabra09G0115300 Salix brachista
SalBow6G4405 Salvia bowleyana
Sc12g0004320 Simmondsia chinensis
Sed0020109 Sechium edule
SEGI_32260 Sequoiadendron giganteum
SGA_v2.0_scaffold147G36361 Striga asiatica
SMO116G0019 Selaginella moellendorffii
Solyc11g067160.2 Solanum lycopersicum
Sopen11g026840 Solanum pennellii
Sp4g10460 Schrenkiella parvula
TAR369G0360 Trochodendron aralioides
THA.LOC104826410 Tarenaya hassleriana
Thecc.09G287600 Theobroma cacao
Thhalv10016780m.g Eutrema salsugineum
Thhalv10017835m.g Eutrema salsugineum
TPR.G23777 Trifolium pratense
TWI75G0596 Tripterygium wilfordii
unitig_899.g14958 Utricularia gibba
vmacro03297 Vaccinium macrocarpon
VMungo1080G0855 Vigna mungo
Zm00001eb096060 Zea mays

User provided reference genes

Program Settings