Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p30110 Brassica napus
A09p08280 Brassica napus
Aa31LG1G18560 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_369.268 Anthoceros agrestis
Actinidia08882 Actinidia chinensis
Actinidia36818 Actinidia chinensis
Ah.03g143420 Amaranthus hybridus
Ah.07g204620 Amaranthus hybridus
Ah.09g236100 Amaranthus hybridus
AL8G40540 Arabidopsis lyrata
Aqoxy3G00618 Aquilegia oxysepala
Aqoxy3G01572 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3A01UJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CP8X4X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HT4698 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S11VKX Arachis hypogaea
AT5G63480 Arabidopsis thaliana
ATR0171G017 Amborella trichopoda
Atru.chr6.1808 Acer truncatum
AUR62002017 Chenopodium quinoa
AUR62003784 Chenopodium quinoa
BcaB02g09758 Brassica carinata
BcaB04g19920 Brassica carinata
BcaB07g29688 Brassica carinata
BcaC04g23332 Brassica carinata
BolC3t18550H Brassica oleracea
BolC9t53848H Brassica oleracea
BraA06t25962Z Brassica rapa
BraA09t36478Z Brassica rapa
C03p62960 Brassica napus
C09p09360 Brassica napus
CANSAT80G1472 Cannabis sativa
CARHR277330 Cardamine hirsuta
Carub.0008s2418 Capsella rubella
Ca_01190_v3 Cicer arietinum L.
Ca_16053_v3 Cicer arietinum L.
CBR_g39765 Chara braunii
Cc08_g07550 Coffea canephora
CDE04G2377 Ceratophyllum demersum
CDE10G0174 Ceratophyllum demersum
CDE10G0912 Ceratophyllum demersum
Cfa018784 Carpinus fangiana
Ciclev10032864m.g Citrus clementina
CiPaw.11G006200 Carya illinoinensis
CiPaw.12G044000 Carya illinoinensis
ClCG06G017970 Citrullus lanatus
COL.COLO4_28143 Corchorus olitorius
Cpa.g.sc13.100 Carica papaya
CsaV3_1G000500 Cucumis sativus L.
CSS0003205 Camellia sinensis var. sinensis
CSS0010891 Camellia sinensis var. sinensis
CSS0033680 Camellia sinensis var. sinensis
CSS0043065 Camellia sinensis var. sinensis
CSS0049043 Camellia sinensis var. sinensis
DCAR_016386 Daucus carota
DCAR_021623 Daucus carota
Dinv23158 Davidia involucrata
Duzib205G0229 Durio zibethinus
ECA232G1626 Erigeron canadensis
EL10Ac6g15093 Beta vulgaris
FAN15G0439 Fragaria x ananassa
FAN19G2931 Fragaria x ananassa
FAN20G0870 Fragaria x ananassa
FAN23G0903 Fragaria x ananassa
FAN23G2258 Fragaria x ananassa
FAN26G2573 Fragaria x ananassa
FAN27G0224 Fragaria x ananassa
FvH4_1g29942 Fragaria vesca
FvH4_2g37750 Fragaria vesca
Glyma.04G196600 Glycine max
Glyma.06G169200 Glycine max
Gohir.1Z049409 Gossypium hirsutum
Gohir.A07G050600 Gossypium hirsutum
Gohir.D07G055100 Gossypium hirsutum
Gorai.001G058300 Gossypium raimondii
GSVIVG01008565001 Vitis vinifera
HanXRQChr09g0273301 Helianthus annuus
Haze_07152 Corylus avellana
HPP92_023119 Vanilla planifolia
Hund08624 Selenicereus undatus
Hund13632 Selenicereus undatus
Lalb_Chr23g0273681 Lupinus albus
Lj1g0005006 Lotus japonicus
Lj5A95T81 Lonicera japonica
Lsat_1_v5_gn_4_81240 Lactuca sativa
Manes.14G050400 Manihot esculenta
Mapoly0007s0225 Marchantia polymorpha
MBI07_g28244_MAGBIO Magnolia biondii
MD08G1006700 Malus domestica
MD15G1005900 Malus domestica
Medtr3g099130 Medicago truncatula
MELO3C026202.2 Cucumis melo
Migut.E01449 Erythranthe guttata
MSTRG.25825 Avicennia marina
Nitab4.5_0000264g0120 Nicotiana tabacum
Nitab4.5_0001362g0010 Nicotiana tabacum
Nn3g16438 Nelumbo nucifera
Nn4g22289 Nelumbo nucifera
Oeu001035.1 Olea europaea
Oeu009657.1 Olea europaea
Oeu028217.1 Olea europaea
Oeu040668.1 Olea europaea
Os04g0388601 Oryza sativa ssp. japonica
Peaxi162Scf00045g01932 Petunia axillaris
PGSC0003DMG400026284 Solanum tuberosum
Phvul.009G165600 Phaseolus vulgaris
Potri.012G099200 Populus trichocarpa
Potri.015G097800 Populus trichocarpa
Pp3c7_3280 Physcomitrium patens
Prupe.1G358600 Prunus persica
Psat5g051960 Pisum sativum
PSO017G3900 Papaver somniferum
PSO478G3696 Papaver somniferum
QL10p002677 Quercus lobata
RcHm_v2.0_Chr6g0303761 Rosa chinensis
Rhsim12G0176000 Rhododendron simsii
Sabra12G0072400 Salix brachista
Sabra15G0118500 Salix brachista
SalBow8G3527 Salvia bowleyana
Sc04g0000550 Simmondsia chinensis
Sed0002904 Sechium edule
SEGI_01116 Sequoiadendron giganteum
SEGI_13536 Sequoiadendron giganteum
SGA_v2.0_scaffold169G38603 Striga asiatica
SMO364G0653 Selaginella moellendorffii
Solyc08g006670.3 Solanum lycopersicum
Sopen08g002620 Solanum pennellii
Sp2g26560 Schrenkiella parvula
TAR371G0831 Trochodendron aralioides
TAR629G0488 Trochodendron aralioides
THA.LOC104798944 Tarenaya hassleriana
Thecc.03G130500 Theobroma cacao
Thhalv10004987m.g Eutrema salsugineum
TPR.G14215 Trifolium pratense
TWI14G1436 Tripterygium wilfordii
TWI23G0649 Tripterygium wilfordii
unitig_32.g10935 Utricularia gibba
vmacro16727 Vaccinium macrocarpon
VMungo1309G0665 Vigna mungo
Zm00001eb085410 Zea mays
Zm00001eb421130 Zea mays

User provided reference genes

Program Settings