Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p35020 Brassica napus
Aa31LG9G16020 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_369.550 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_369.551 Anthoceros agrestis
Actinidia02320 Actinidia chinensis
Actinidia26868 Actinidia chinensis
Ah.00g000100 Amaranthus hybridus
AL1G49260 Arabidopsis lyrata
AL2G29970 Arabidopsis lyrata
Aqoxy7G03349 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.506A6S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KLAQ17 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NIL5QZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UC4N4Q Arachis hypogaea
AT1G31220 Arabidopsis thaliana
ATR0561G011 Amborella trichopoda
Atru.chr1.2476 Acer truncatum
AUR62009518 Chenopodium quinoa
AUR62034770 Chenopodium quinoa
BcaB07g32784 Brassica carinata
BcaC05g27152 Brassica carinata
BolC5t31778H Brassica oleracea
BraA09t39033Z Brassica rapa
C05p30400 Brassica napus
C05p30410 Brassica napus
CANSAT56G1966 Cannabis sativa
CARHR030700 Cardamine hirsuta
Carub.0001s2962 Capsella rubella
Ca_03362_v3 Cicer arietinum L.
Ca_19224_v3 Cicer arietinum L.
Ca_29267_v3 Cicer arietinum L.
CBR_g45412 Chara braunii
Cc09_g05060 Coffea canephora
Cc09_g05080 Coffea canephora
CDE04G0494 Ceratophyllum demersum
Ciclev10016118m.g Citrus clementina
CiPaw.09G101500 Carya illinoinensis
ClCG09G000980 Citrullus lanatus
COL.COLO4_31868 Corchorus olitorius
Cpa.g.sc89.56 Carica papaya
Cre12.g550700 Chlamydomonas reinhardtii
CsaV3_7G034450 Cucumis sativus L.
CSS0028564 Camellia sinensis var. sinensis
DCAR_016081 Daucus carota
DCAR_016082 Daucus carota
DCAR_027849 Daucus carota
Dinv13961 Davidia involucrata
Duzib160G0783 Durio zibethinus
Duzib235G1331 Durio zibethinus
ECA234G3218 Erigeron canadensis
EL10Ac5g11305 Beta vulgaris
Eucgr.A00642 Eucalyptus grandis
FAN04G2939 Fragaria x ananassa
FAN08G1835 Fragaria x ananassa
FAN13G1156 Fragaria x ananassa
FAN18G0596 Fragaria x ananassa
FAN18G3073 Fragaria x ananassa
Glyma.16G037200 Glycine max
Glyma.19G115900 Glycine max
Gohir.A06G152900 Gossypium hirsutum
Gohir.D06G159300 Gossypium hirsutum
Gorai.010G186000 Gossypium raimondii
GSVIVG01004448001 Vitis vinifera
HanXRQChr12g0373991 Helianthus annuus
HanXRQChr12g0374001 Helianthus annuus
Haze_05509 Corylus avellana
Haze_05515 Corylus avellana
Haze_06907 Corylus avellana
Haze_13876 Corylus avellana
Hma1.2p1_0660F.1_g197565 Hydrangea macrophylla
HPP92_008146 Vanilla planifolia
Hund02539 Selenicereus undatus
Hund08510 Selenicereus undatus
Lalb_Chr22g0358501 Lupinus albus
Lj1g0004963 Lotus japonicus
Lj2A262G50 Lonicera japonica
Lsat_1_v5_gn_3_44480 Lactuca sativa
Lsat_1_v5_gn_5_121860 Lactuca sativa
Manes.03G134302 Manihot esculenta
Mapoly0084s0080 Marchantia polymorpha
MCO11G941 Micromonas commoda
MD03G1153200 Malus domestica
MD10G1330400 Malus domestica
Medtr1g007170 Medicago truncatula
MELO3C024353.2 Cucumis melo
Migut.H01601 Erythranthe guttata
Migut.M01387 Erythranthe guttata
MSTRG.14615 Avicennia marina
MSTRG.16020 Avicennia marina
Nitab4.5_0000143g0400 Nicotiana tabacum
Nitab4.5_0001198g0130 Nicotiana tabacum
Nn1g07342 Nelumbo nucifera
Oeu044418.1 Olea europaea
Os05g0270800 Oryza sativa ssp. japonica
Os08g0500900 Oryza sativa ssp. japonica
Os08g0501132 Oryza sativa ssp. japonica
Peaxi162Scf00558g00317 Petunia axillaris
PGR044G2560 Punica granatum
PGSC0003DMG400013269 Solanum tuberosum
Phvul.001G115300 Phaseolus vulgaris
Potri.012G107500 Populus trichocarpa
Pp3c13_14970 Physcomitrium patens
Pp3s32_101 Physcomitrium patens
PRCOL_00005535 Prasinoderma coloniale
Prupe.4G012000 Prunus persica
Psat6g035160 Pisum sativum
PSO339G1452 Papaver somniferum
PSO384G2339 Papaver somniferum
QL03p029835 Quercus lobata
QL10p003604 Quercus lobata
RcHm_v2.0_Chr7g0213451 Rosa chinensis
Rhsim04G0088200 Rhododendron simsii
Rhsim04G0088400 Rhododendron simsii
Rhsim04G0089100 Rhododendron simsii
Rhsim04G0092900 Rhododendron simsii
Sabra16G0117800 Salix brachista
SalBow8G2877 Salvia bowleyana
Sc04g0003930 Simmondsia chinensis
Sc04g0003960 Simmondsia chinensis
Sed0023635 Sechium edule
SEGI_15072 Sequoiadendron giganteum
SEGI_22933 Sequoiadendron giganteum
SGA_v2.0_scaffold49G18245 Striga asiatica
SMO353G0366 Selaginella moellendorffii
Solyc11g012100.2 Solanum lycopersicum
Sopen11g006890 Solanum pennellii
Sp1g27030 Schrenkiella parvula
TAR624G0708 Trochodendron aralioides
TAR626G0924 Trochodendron aralioides
TAR629G3434 Trochodendron aralioides
THA.LOC104812711 Tarenaya hassleriana
Thecc.06G231900 Theobroma cacao
Thhalv10008369m.g Eutrema salsugineum
TPR.G17170 Trifolium pratense
TPR.G24522 Trifolium pratense
unitig_37.g12191 Utricularia gibba
vmacro03650 Vaccinium macrocarpon
vmacro03839 Vaccinium macrocarpon
VMungo0647G0909 Vigna mungo
VMungo1383G1280 Vigna mungo
Zm00001eb082710 Zea mays

User provided reference genes

Program Settings