Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p10700 Brassica napus
Aa31LG1G13190 Aethionema arabicum
Aa31LG1G13200 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4159 Anthoceros agrestis
Actinidia37072 Actinidia chinensis
Ah.01g001670 Amaranthus hybridus
AL6G33360 Arabidopsis lyrata
Aqoxy1G00008 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9EB2HI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E6G7P2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J76LRM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M13D0Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M18R9V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P5ABU7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PADK5G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QCQ2D8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TQJ2IB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V0D9HX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XD28JK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XDN0DP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YZK62K Arachis hypogaea
AT5G22340 Arabidopsis thaliana
ATR0307G012 Amborella trichopoda
Atru.chr3.3168 Acer truncatum
AUR62014970 Chenopodium quinoa
AUR62015198 Chenopodium quinoa
AUR62017661 Chenopodium quinoa
BcaB01g04714 Brassica carinata
BcaC01g06587 Brassica carinata
BcaC01g06590 Brassica carinata
BolC3t13704H Brassica oleracea
BraA03t10382Z Brassica rapa
C03p12310 Brassica napus
CANSAT54G1533 Cannabis sativa
CARHR191200 Cardamine hirsuta
Carub.0006s2008 Capsella rubella
Ca_19443_v3 Cicer arietinum L.
CBR_g22416 Chara braunii
CBR_g29426 Chara braunii
Cc01_g08820 Coffea canephora
CDE08G0019 Ceratophyllum demersum
Cfa009987 Carpinus fangiana
Ciclev10028837m.g Citrus clementina
Ciclev10029637m.g Citrus clementina
Ciclev10029895m.g Citrus clementina
Ciclev10029903m.g Citrus clementina
CiPaw.14G098000 Carya illinoinensis
ClCG01G011810 Citrullus lanatus
COL.COLO4_34005 Corchorus olitorius
Cpa.g.sc195.24 Carica papaya
Cpa.g.sc195.25 Carica papaya
Cpa.g.sc195.26 Carica papaya
CsaV3_1G015030 Cucumis sativus L.
CSS0011344 Camellia sinensis var. sinensis
CSS0028109 Camellia sinensis var. sinensis
DCAR_022894 Daucus carota
Dinv08924 Davidia involucrata
Duzib168G0172 Durio zibethinus
Duzib170G0830 Durio zibethinus
ECA238G0234 Erigeron canadensis
EL10Ac9g22916 Beta vulgaris
Eucgr.J00523 Eucalyptus grandis
FAN15G3687 Fragaria x ananassa
FAN20G2771 Fragaria x ananassa
FAN24G0713 Fragaria x ananassa
FAN24G3375 Fragaria x ananassa
FvH4_2g10341 Fragaria vesca
FvH4_2g10360 Fragaria vesca
FvH4_2g10370 Fragaria vesca
FvH4_2g14080 Fragaria vesca
Glyma.11G181300 Glycine max
Glyma.12G091900 Glycine max
Gohir.A05G079500 Gossypium hirsutum
Gohir.D05G082400 Gossypium hirsutum
Gorai.009G084000 Gossypium raimondii
GSVIVG01036080001 Vitis vinifera
HanXRQChr06g0183931 Helianthus annuus
Haze_23346 Corylus avellana
Hma1.2p1_0319F.1_g123910 Hydrangea macrophylla
Hma1.2p1_0319F.1_g123920 Hydrangea macrophylla
Hma1.2p1_0319F.1_g123930 Hydrangea macrophylla
HPP92_001703 Vanilla planifolia
Hund18776 Selenicereus undatus
Lalb_Chr03g0028241 Lupinus albus
Lj1A257T31 Lonicera japonica
Lj3g0020097 Lotus japonicus
Lsat_1_v5_gn_2_3840 Lactuca sativa
Manes.04G001400 Manihot esculenta
Mapoly0094s0013 Marchantia polymorpha
MBI19_g15080_MAGBIO Magnolia biondii
MBI19_g34002_MAGBIO Magnolia biondii
MCO04G204 Micromonas commoda
MD03G1149900 Malus domestica
MD09G1069600 Malus domestica
Medtr4g052500 Medicago truncatula
MELO3C025590.2 Cucumis melo
Migut.D02364 Erythranthe guttata
MSTRG.18771 Avicennia marina
Nitab4.5_0000731g0080 Nicotiana tabacum
Nitab4.5_0008177g0060 Nicotiana tabacum
Nn7g37254 Nelumbo nucifera
Oeu014472.1 Olea europaea
Os03g0322600 Oryza sativa ssp. japonica
Peaxi162Scf00224g00218 Petunia axillaris
PGR119G1266 Punica granatum
Phvul.011G096200 Phaseolus vulgaris
Potri.009G160500 Populus trichocarpa
Pp3c20_23100 Physcomitrium patens
Prupe.6G135900 Prunus persica
Psat7g187240 Pisum sativum
PSO339G6531 Papaver somniferum
PSO384G1357 Papaver somniferum
QL01p011847 Quercus lobata
RcHm_v2.0_Chr5g0045261 Rosa chinensis
Rhsim01G0203700 Rhododendron simsii
SalBow6G0611 Salvia bowleyana
Sc06g0008690 Simmondsia chinensis
Sed0024067 Sechium edule
SEGI_27763 Sequoiadendron giganteum
SGA_v2.0_scaffold7G04001 Striga asiatica
SMO140G0002 Selaginella moellendorffii
SMO338G0026 Selaginella moellendorffii
Solyc11g068680.2 Solanum lycopersicum
Sopen11g027400 Solanum pennellii
Sp6g22900 Schrenkiella parvula
TAR633G0448 Trochodendron aralioides
TAR633G1245 Trochodendron aralioides
TAR633G2192 Trochodendron aralioides
TAR633G2685 Trochodendron aralioides
THA.LOC104810925 Tarenaya hassleriana
Thecc.09G278700 Theobroma cacao
Thhalv10014124m.g Eutrema salsugineum
TPR.G17201 Trifolium pratense
TWI31G0673 Tripterygium wilfordii
unitig_736.g22394 Utricularia gibba
vmacro14339 Vaccinium macrocarpon
VMungo1127G0965 Vigna mungo
VMungo1127G1152 Vigna mungo
Zm00001eb015340 Zea mays
Zm00001eb285540 Zea mays
Zm00001eb395560 Zea mays

User provided reference genes

Program Settings