Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p36580 Brassica napus
A10p03600 Brassica napus
Aa31LG1G19650 Aethionema arabicum
Actinidia09739 Actinidia chinensis
Ah.03g136860 Amaranthus hybridus
AL1G14860 Arabidopsis lyrata
Aqoxy5G00128 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1871C9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N42FWL Arachis hypogaea
AT1G05087 Arabidopsis thaliana
AT1G05090 Arabidopsis thaliana
AT4G20720 Arabidopsis thaliana
ATR0580G041 Amborella trichopoda
Atru.chr6.3225 Acer truncatum
AUR62043283 Chenopodium quinoa
AUR62043954 Chenopodium quinoa
BcaB02g06881 Brassica carinata
BcaB04g17601 Brassica carinata
BcaB04g19303 Brassica carinata
BcaB05g22977 Brassica carinata
BcaC05g24419 Brassica carinata
BcaC07g36863 Brassica carinata
BcaC07g36864 Brassica carinata
BolC5t29109H Brassica oleracea
BolC8t46974H Brassica oleracea
BraA08t35560Z Brassica rapa
BraA10t42636Z Brassica rapa
C02p46800 Brassica napus
C05p03280 Brassica napus
C08p01740 Brassica napus
CAN.G290.3 Capsicum annuum
CANSAT64G0851 Cannabis sativa
CARHR004550 Cardamine hirsuta
Carub.0001s0438 Capsella rubella
Ca_22840_v3 Cicer arietinum L.
Cc05_g03620 Coffea canephora
CDE02G3131 Ceratophyllum demersum
CDE05G0211 Ceratophyllum demersum
Cfa014342 Carpinus fangiana
Ciclev10014304m.g Citrus clementina
CiPaw.03G158000 Carya illinoinensis
ClCG02G009040 Citrullus lanatus
COL.COLO4_21830 Corchorus olitorius
CsaV3_2G034680 Cucumis sativus L.
CSS0010990 Camellia sinensis var. sinensis
CSS0011006 Camellia sinensis var. sinensis
CSS0039058 Camellia sinensis var. sinensis
DCAR_021157 Daucus carota
DCAR_021158 Daucus carota
Dinv08748 Davidia involucrata
Dinv39728 Davidia involucrata
Duzib133G0129 Durio zibethinus
Duzib133G0609 Durio zibethinus
Duzib138G1383 Durio zibethinus
Duzib211G0060 Durio zibethinus
ECA236G2918 Erigeron canadensis
EL10Ac6g14187 Beta vulgaris
Eucgr.K00777 Eucalyptus grandis
FAN02G3845 Fragaria x ananassa
FAN05G0986 Fragaria x ananassa
FAN09G2639 Fragaria x ananassa
FAN14G3333 Fragaria x ananassa
FvH4_6g42760 Fragaria vesca
Glyma.08G294700 Glycine max
Glyma.18G128300 Glycine max
Gohir.A07G081700 Gossypium hirsutum
Gohir.D07G088200 Gossypium hirsutum
Gorai.001G094400 Gossypium raimondii
GSVIVG01030472001 Vitis vinifera
HanXRQChr16g0506711 Helianthus annuus
Haze_12803 Corylus avellana
Hma1.2p1_0895F.1_g233780 Hydrangea macrophylla
HPP92_018527 Vanilla planifolia
HPP92_018560 Vanilla planifolia
Lalb_Chr10g0107231 Lupinus albus
Lj1A770T48 Lonicera japonica
Lj1A781G48 Lonicera japonica
Lj1P773T39 Lonicera japonica
Lj3P615T7 Lonicera japonica
Lj4g0021844 Lotus japonicus
Lj8A127T46 Lonicera japonica
Lsat_1_v5_gn_5_166360 Lactuca sativa
Lsat_1_v5_gn_7_93260 Lactuca sativa
Manes.12G072400 Manihot esculenta
Manes.13G068800 Manihot esculenta
Mapoly0147s0032 Marchantia polymorpha
MBI14_g48057_MAGBIO Magnolia biondii
MD09G1071600 Malus domestica
MD17G1100100 Malus domestica
MD17G1100200 Malus domestica
MD17G1100500 Malus domestica
Medtr8g061890 Medicago truncatula
MELO3C019298.2 Cucumis melo
Migut.H01229 Erythranthe guttata
MSTRG.14146 Avicennia marina
Nitab4.5_0000130g0270 Nicotiana tabacum
Nitab4.5_0004549g0030 Nicotiana tabacum
Nitab4.5_0004549g0040 Nicotiana tabacum
Nitab4.5_0008855g0010 Nicotiana tabacum
Nn8g40525 Nelumbo nucifera
Oeu036745.2 Olea europaea
Peaxi162Scf00007g00224 Petunia axillaris
PGR142G3338 Punica granatum
PGSC0003DMG400001080 Solanum tuberosum
Phvul.003G071200 Phaseolus vulgaris
Potri.002G227200 Populus trichocarpa
Prupe.3G214000 Prunus persica
Psat4g129200 Pisum sativum
PSO339G4227 Papaver somniferum
PSO384G2490 Papaver somniferum
QL08p031674 Quercus lobata
RcHm_v2.0_Chr2g0158651 Rosa chinensis
Rhsim06G0164700 Rhododendron simsii
Rhsim06G0165100 Rhododendron simsii
Rhsim06G0165400 Rhododendron simsii
RhsimUnG0010700 Rhododendron simsii
Sabra02G0173800 Salix brachista
SalBow1G7937 Salvia bowleyana
SalBow1G8666 Salvia bowleyana
Sc06g0009590 Simmondsia chinensis
Sc21g0001240 Simmondsia chinensis
Sed0009256 Sechium edule
Sed0009527 Sechium edule
SEGI_06248 Sequoiadendron giganteum
SGA_v2.0_scaffold159G37574 Striga asiatica
SGA_v2.0_scaffold49G18342 Striga asiatica
Solyc07g049750.3 Solanum lycopersicum
Sopen07g025370 Solanum pennellii
Sp1g03960 Schrenkiella parvula
TAR627G0869 Trochodendron aralioides
THA.LOC104801549 Tarenaya hassleriana
Thecc.01G177600 Theobroma cacao
Thhalv10006711m.g Eutrema salsugineum
TPR.G29371 Trifolium pratense
TWI36G1417 Tripterygium wilfordii
TWI75G1493 Tripterygium wilfordii
unitig_52.g17609 Utricularia gibba
unitig_62.g23416 Utricularia gibba
vmacro12184 Vaccinium macrocarpon
VMungo0251G0036 Vigna mungo
VMungo0251G1899 Vigna mungo

User provided reference genes

Program Settings