Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p26960 Brassica napus
A07p44750 Brassica napus
Aa31LG4G1250 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2014 Anthoceros agrestis
Actinidia08935 Actinidia chinensis
Actinidia26580 Actinidia chinensis
Actinidia26581 Actinidia chinensis
Actinidia36864 Actinidia chinensis
Ah.14g085670 Amaranthus hybridus
AL2G40440 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.7IZ6IW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HUQR60 Arachis hypogaea
AT1G80940 Arabidopsis thaliana
ATR0580G392 Amborella trichopoda
Atru.chr1.2804_Atru.chr1.2805 Acer truncatum
AUR62032996 Chenopodium quinoa
BcaB02g07237 Brassica carinata
BcaB02g08711 Brassica carinata
BcaB07g33703 Brassica carinata
BcaB07g33704 Brassica carinata
BcaB07g33705 Brassica carinata
BcaC08g47533 Brassica carinata
BcaNung04166 Brassica carinata
BolC6t38128H Brassica oleracea
BolC6t40373H Brassica oleracea
BraA07t30340Z Brassica rapa
BraA07t31983Z Brassica rapa
C06p29630 Brassica napus
C06p53570 Brassica napus
CAN.G1008.7 Capsicum annuum
CANSAT56G2690 Cannabis sativa
CARHR073510 Cardamine hirsuta
CARHR073520 Cardamine hirsuta
Carub.0002s2660 Capsella rubella
Cc04_g05300 Coffea canephora
CDE04G1090 Ceratophyllum demersum
CDE07G1687 Ceratophyllum demersum
Cfa001857 Carpinus fangiana
Ciclev10026461m.g Citrus clementina
CiPaw.01G256500 Carya illinoinensis
CiPaw.02G163400 Carya illinoinensis
ClCG09G003490 Citrullus lanatus
COL.COLO4_26772 Corchorus olitorius
Cpa.g.c28380.1 Carica papaya
CsaV3_7G031710 Cucumis sativus L.
CSS0015514 Camellia sinensis var. sinensis
CSS0039254 Camellia sinensis var. sinensis
DCAR_021374 Daucus carota
Dinv21426 Davidia involucrata
Duzib192G0805 Durio zibethinus
Duzib235G0288 Durio zibethinus
ECA232G4196 Erigeron canadensis
ECA247G2189 Erigeron canadensis
EL10Ac8g19398 Beta vulgaris
Eucgr.F03985 Eucalyptus grandis
Eucgr.J03130 Eucalyptus grandis
FAN02G4537 Fragaria x ananassa
FAN05G5289 Fragaria x ananassa
FAN09G0036 Fragaria x ananassa
FAN14G0578 Fragaria x ananassa
FvH4_6g28270 Fragaria vesca
Glyma.07G021400 Glycine max
Glyma.08G220400 Glycine max
Gohir.A11G075200 Gossypium hirsutum
Gohir.D11G079900 Gossypium hirsutum
Gorai.007G085500 Gossypium raimondii
GSVIVG01016103001 Vitis vinifera
HanXRQChr04g0100021 Helianthus annuus
HanXRQChr09g0274181 Helianthus annuus
Haze_16689 Corylus avellana
Hma1.2p1_0329F.1_g127290 Hydrangea macrophylla
HPP92_010348 Vanilla planifolia
Hund12559 Selenicereus undatus
Lalb_Chr01g0011991 Lupinus albus
Lalb_Chr25g0278731 Lupinus albus
Lj3g0027435 Lotus japonicus
Lj5A81T85 Lonicera japonica
Lsat_1_v5_gn_1_30801 Lactuca sativa
Lsat_1_v5_gn_4_85061 Lactuca sativa
Manes.04G100900 Manihot esculenta
Manes.11G069200 Manihot esculenta
Mapoly0128s0009 Marchantia polymorpha
MBI15_g08404_MAGBIO Magnolia biondii
MD09G1227600 Malus domestica
MD17G1226400 Malus domestica
Medtr4g007700 Medicago truncatula
MELO3C023486.2 Cucumis melo
Migut.I00626 Erythranthe guttata
MSTRG.11221 Avicennia marina
MSTRG.22842 Avicennia marina
MSTRG.9395 Avicennia marina
Nitab4.5_0002700g0060 Nicotiana tabacum
Nitab4.5_0004738g0090 Nicotiana tabacum
Nn8g40079 Nelumbo nucifera
Nn8g40087 Nelumbo nucifera
Oeu003125.1 Olea europaea
Oeu051555.1 Olea europaea
Os02g0793900 Oryza sativa ssp. japonica
Peaxi162Scf00314g01032 Petunia axillaris
PGR102G0492 Punica granatum
PGSC0003DMG400014155 Solanum tuberosum
Phvul.008G253200 Phaseolus vulgaris
Potri.001G041900 Populus trichocarpa
Potri.003G184925 Populus trichocarpa
Pp3c16_25700 Physcomitrium patens
Pp3c25_9780 Physcomitrium patens
Prupe.3G103600 Prunus persica
Psat7g262200 Pisum sativum
PSO063G0682 Papaver somniferum
PSO782G0145 Papaver somniferum
QL05p036841 Quercus lobata
QL05p036845 Quercus lobata
RcHm_v2.0_Chr2g0132311 Rosa chinensis
Rhsim08G0203100 Rhododendron simsii
Rhsim12G0185400 Rhododendron simsii
Sabra01G0028700 Salix brachista
Sabra03G0135500 Salix brachista
SalBow1G1272 Salvia bowleyana
Sc12g0008250 Simmondsia chinensis
Sed0008280 Sechium edule
SEGI_02613 Sequoiadendron giganteum
SEGI_29844 Sequoiadendron giganteum
SEGI_41275 Sequoiadendron giganteum
SGA_v2.0_scaffold74G24593 Striga asiatica
SMO145G0139 Selaginella moellendorffii
Solyc03g117670.4 Solanum lycopersicum
Sopen03g036580 Solanum pennellii
Sp5g34800 Schrenkiella parvula
TAR625G1145 Trochodendron aralioides
THA.LOC104808172 Tarenaya hassleriana
Thecc.06G046600 Theobroma cacao
Thhalv10019121m.g Eutrema salsugineum
TPR.G1583 Trifolium pratense
TPR.G3367 Trifolium pratense
TWI12G1456 Tripterygium wilfordii
TWI75G0559 Tripterygium wilfordii
unitig_22.g6274 Utricularia gibba
unitig_22.g6275 Utricularia gibba
vmacro16842 Vaccinium macrocarpon
VMungo0647G2390 Vigna mungo
Zm00001eb257680 Zea mays

User provided reference genes

Program Settings