Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p47750 Brassica napus
Aa31LG5G3560 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5248 Anthoceros agrestis
Actinidia19979 Actinidia chinensis
Actinidia27521 Actinidia chinensis
Ah.11g050020 Amaranthus hybridus
AL8G16570 Arabidopsis lyrata
Aqoxy3G04193 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7J2YFM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T9F7M4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UDPJ1A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XNPI4G Arachis hypogaea
AT5G43680 Arabidopsis thaliana
ATR0665G285 Amborella trichopoda
AUR62011949 Chenopodium quinoa
AUR62032263 Chenopodium quinoa
BcaC06g31683 Brassica carinata
BcaC06g34636 Brassica carinata
BolC7t43153H Brassica oleracea
BraA06t27643Z Brassica rapa
C07p26250 Brassica napus
CAN.G257.103 Capsicum annuum
CAN.G851.23 Capsicum annuum
CANSAT11G0223 Cannabis sativa
CANSAT11G2293 Cannabis sativa
CARHR179930 Cardamine hirsuta
Carub.0008s0497 Capsella rubella
Ca_14753_v3 Cicer arietinum L.
Ca_24537_v3 Cicer arietinum L.
CBR_g32014 Chara braunii
Cc01_g05510 Coffea canephora
Cc01_g05520 Coffea canephora
Cc01_g08030 Coffea canephora
CDE03G0266 Ceratophyllum demersum
CDE07G1268 Ceratophyllum demersum
Cfa018256 Carpinus fangiana
Ciclev10006717m.g Citrus clementina
CiPaw.02G117200 Carya illinoinensis
ClCG01G004480 Citrullus lanatus
COL.COLO4_15774 Corchorus olitorius
Cpa.g.sc58.39 Carica papaya
CsaV3_5G004690 Cucumis sativus L.
CSS0021022 Camellia sinensis var. sinensis
DCAR_023471 Daucus carota
DCAR_028371 Daucus carota
Dinv22486 Davidia involucrata
Duzib052G0322 Durio zibethinus
Duzib212G0616 Durio zibethinus
ECA236G0510 Erigeron canadensis
EL10Ac5g10469 Beta vulgaris
Eucgr.G02606 Eucalyptus grandis
FAN12G1710 Fragaria x ananassa
FAN12G2588 Fragaria x ananassa
FAN17G2982 Fragaria x ananassa
FAN22G1699 Fragaria x ananassa
FvH4_4g02310 Fragaria vesca
Glyma.02G142900 Glycine max
Glyma.10G031500 Glycine max
Gohir.A02G035301 Gossypium hirsutum
Gohir.D02G042266 Gossypium hirsutum
Gorai.005G046600 Gossypium raimondii
GSVIVG01018102001 Vitis vinifera
HanXRQChr02g0032381 Helianthus annuus
Haze_11274 Corylus avellana
Haze_21184 Corylus avellana
HPP92_015262 Vanilla planifolia
Hund02875 Selenicereus undatus
Lalb_Chr02g0142451 Lupinus albus
Lj5g0014373 Lotus japonicus
Lsat_1_v5_gn_8_94841 Lactuca sativa
Manes.01G202000 Manihot esculenta
Mapoly0029s0143 Marchantia polymorpha
MBI02_g40862_MAGBIO Magnolia biondii
MBI11_g15920_MAGBIO Magnolia biondii
MBI15_g19756_MAGBIO Magnolia biondii
MBI16_g44196_MAGBIO Magnolia biondii
MBI16_g45671_MAGBIO Magnolia biondii
MBI18_g19775_MAGBIO Magnolia biondii
MCO01G785 Micromonas commoda
MD04G1026200 Malus domestica
Medtr1g070900 Medicago truncatula
MELO3C005475.2 Cucumis melo
Migut.D00369 Erythranthe guttata
MSTRG.18281 Avicennia marina
Nitab4.5_0001423g0070 Nicotiana tabacum
Nitab4.5_0001840g0120 Nicotiana tabacum
Nitab4.5_0001903g0040 Nicotiana tabacum
Nitab4.5_0002156g0030 Nicotiana tabacum
Nitab4.5_0004235g0010 Nicotiana tabacum
Nn1g02548 Nelumbo nucifera
Nn3g19501 Nelumbo nucifera
Nn3g20649 Nelumbo nucifera
Nn8g40523 Nelumbo nucifera
Nn8g40524 Nelumbo nucifera
Oeu025788.2 Olea europaea
Os11g0550900 Oryza sativa ssp. japonica
Os11g0551350 Oryza sativa ssp. japonica
Peaxi162Scf00434g00622 Petunia axillaris
PGSC0003DMG400003760 Solanum tuberosum
PGSC0003DMG400017885 Solanum tuberosum
Phvul.007G177000 Phaseolus vulgaris
Potri.002G045500 Populus trichocarpa
Pp3c17_23420 Physcomitrium patens
Prupe.1G027700 Prunus persica
Prupe.1G175900 Prunus persica
Prupe.2G050700 Prunus persica
Psat0s8363g0040 Pisum sativum
Psat1g083920 Pisum sativum
Psat1g084080 Pisum sativum
Psat3g119160 Pisum sativum
Psat3g119240 Pisum sativum
Psat3g119360 Pisum sativum
PSO210G0029 Papaver somniferum
PSO238G0055 Papaver somniferum
QL06p015203 Quercus lobata
QL06p015215 Quercus lobata
RcHm_v2.0_Chr4g0389631 Rosa chinensis
Sabra02G0036500 Salix brachista
SalBow4G0733 Salvia bowleyana
Sc24g0004270 Simmondsia chinensis
Sed0023556 Sechium edule
SEGI_11901 Sequoiadendron giganteum
SEGI_21191 Sequoiadendron giganteum
SEGI_37606 Sequoiadendron giganteum
SGA_v2.0_scaffold138G35287 Striga asiatica
SGA_v2.0_scaffold3169G54286 Striga asiatica
SGA_v2.0_scaffold580G53040 Striga asiatica
SMO116G0410 Selaginella moellendorffii
Solyc01g098540.3 Solanum lycopersicum
Solyc04g080950.3 Solanum lycopersicum
Sopen01g042090 Solanum pennellii
Sopen04g034560 Solanum pennellii
Sp2g08480 Schrenkiella parvula
TAR362G0430 Trochodendron aralioides
Thecc.04G244800 Theobroma cacao
Thhalv10003352m.g Eutrema salsugineum
Thhalv10017901m.g Eutrema salsugineum
TPR.G39035 Trifolium pratense
TWI12G0023 Tripterygium wilfordii
TWI18G0973 Tripterygium wilfordii
VMungo0720G0865 Vigna mungo
Zm00001eb201750 Zea mays

User provided reference genes

Program Settings