Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p03810 Brassica napus
A03p63090 Brassica napus
A08p16660 Brassica napus
Aa31LG2G15810 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1500 Anthoceros agrestis
Actinidia02246 Actinidia chinensis
Ah.01g006460 Amaranthus hybridus
Ah.01g018810 Amaranthus hybridus
AL7G16500 Arabidopsis lyrata
Aqoxy5G01478 Aquilegia oxysepala
AT4G34700 Arabidopsis thaliana
ATR0149G005 Amborella trichopoda
Atru.chr5.3143 Acer truncatum
AUR62010388 Chenopodium quinoa
AUR62016830 Chenopodium quinoa
BcaB03g11818 Brassica carinata
BcaC01g00883 Brassica carinata
BcaNung00672 Brassica carinata
BcaNung00675 Brassica carinata
BcaNung02377 Brassica carinata
BcaNung04613 Brassica carinata
BcaNung07080 Brassica carinata
BolC1t00400H Brassica oleracea
BolC3t20846H Brassica oleracea
BolC7t46501H Brassica oleracea
BraA01t00366Z Brassica rapa
BraA03t15384Z Brassica rapa
BraA08t33631Z Brassica rapa
C01p04120 Brassica napus
C03p85580 Brassica napus
C07p60710 Brassica napus
CAN.G170.100 Capsicum annuum
CANSAT11G1177 Cannabis sativa
CARHR243000 Cardamine hirsuta
Carub.0007s0559 Capsella rubella
Ca_15334_v3 Cicer arietinum L.
Cc02_g16910 Coffea canephora
CDE04G1205 Ceratophyllum demersum
Cfa005111 Carpinus fangiana
Ciclev10029601m.g Citrus clementina
CiPaw.05G073300 Carya illinoinensis
CiPaw.06G128000 Carya illinoinensis
ClCG11G003860 Citrullus lanatus
COL.COLO4_26045 Corchorus olitorius
Cre11.g467668 Chlamydomonas reinhardtii
CsaV3_2G015290 Cucumis sativus L.
CSS0005721 Camellia sinensis var. sinensis
CSS0032904 Camellia sinensis var. sinensis
CSS0039837 Camellia sinensis var. sinensis
Dinv23453 Davidia involucrata
Duzib052G0771 Durio zibethinus
Duzib132G1204 Durio zibethinus
ECA246G1492 Erigeron canadensis
EL10Ac9g21636 Beta vulgaris
Eucgr.G01730 Eucalyptus grandis
FAN15G3179 Fragaria x ananassa
FAN20G0372 Fragaria x ananassa
FAN24G2358 Fragaria x ananassa
FAN27G2088 Fragaria x ananassa
FvH4_2g10430 Fragaria vesca
Glyma.04G008100 Glycine max
Glyma.06G007900 Glycine max
Gohir.A03G199300 Gossypium hirsutum
Gohir.A12G041100 Gossypium hirsutum
Gohir.A13G090800 Gossypium hirsutum
Gohir.D02G220600 Gossypium hirsutum
Gohir.D12G031300 Gossypium hirsutum
Gohir.D13G096825 Gossypium hirsutum
Gorai.002G149100 Gossypium raimondii
Gorai.005G248500 Gossypium raimondii
Gorai.008G032000 Gossypium raimondii
GSVIVG01024171001 Vitis vinifera
HanXRQChr10g0292781 Helianthus annuus
HanXRQChr15g0478311 Helianthus annuus
HanXRQChr17g0544121 Helianthus annuus
Haze_02245 Corylus avellana
Haze_02248 Corylus avellana
Hma1.2p1_0032F.1_g020120 Hydrangea macrophylla
HPP92_012929 Vanilla planifolia
Hund00179 Selenicereus undatus
Hund00187 Selenicereus undatus
Hund06283 Selenicereus undatus
Lalb_Chr08g0246711 Lupinus albus
Lalb_Chr11g0061301 Lupinus albus
Lj3g0011506 Lotus japonicus
Lsat_1_v5_gn_3_44180 Lactuca sativa
Manes.04G083400 Manihot esculenta
Manes.11G081900 Manihot esculenta
Mapoly0002s0197 Marchantia polymorpha
MBI18_g13600_MAGBIO Magnolia biondii
MCO15G169 Micromonas commoda
MD00G1086200 Malus domestica
MD00G1117500 Malus domestica
MD10G1063100 Malus domestica
Medtr3g117550 Medicago truncatula
MELO3C023357.2 Cucumis melo
Migut.B00174 Erythranthe guttata
Migut.N01277 Erythranthe guttata
MSTRG.20040 Avicennia marina
MSTRG.27675 Avicennia marina
Nitab4.5_0001317g0060 Nicotiana tabacum
Nitab4.5_0005266g0100 Nicotiana tabacum
Nitab4.5_0005932g0060 Nicotiana tabacum
Nitab4.5_0010630g0030 Nicotiana tabacum
Nn5g29240 Nelumbo nucifera
Oeu020711.1 Olea europaea
Oeu046129.2 Olea europaea
Os06g0714100 Oryza sativa ssp. japonica
Peaxi162Scf00016g00038 Petunia axillaris
PGR042G2956 Punica granatum
PGSC0003DMG400005571 Solanum tuberosum
Phvul.009G002900 Phaseolus vulgaris
Potri.004G163000 Populus trichocarpa
Potri.009G124600 Populus trichocarpa
Pp3c6_19130 Physcomitrium patens
Prupe.8G083900 Prunus persica
Psat5g003920 Pisum sativum
PSO170G4570 Papaver somniferum
PSO210G0115 Papaver somniferum
QL11p046417 Quercus lobata
RcHm_v2.0_Chr6g0267931 Rosa chinensis
SalBow3G2013 Salvia bowleyana
Sc08g0000900 Simmondsia chinensis
Sed0006755 Sechium edule
Sed0023703 Sechium edule
SEGI_21378 Sequoiadendron giganteum
SGA_v2.0_scaffold207G41877 Striga asiatica
SMO159G0001 Selaginella moellendorffii
Solyc01g110390.2 Solanum lycopersicum
Sopen01g052540 Solanum pennellii
Sp7g32480 Schrenkiella parvula
TAR376G0297 Trochodendron aralioides
THA.LOC104819629 Tarenaya hassleriana
Thecc.02G075100 Theobroma cacao
Thhalv10026594m.g Eutrema salsugineum
TPR.G32174 Trifolium pratense
TWI31G1415 Tripterygium wilfordii
TWI75G0748 Tripterygium wilfordii
TWI79G1074 Tripterygium wilfordii
unitig_60.g25866 Utricularia gibba
VMungo1309G2922 Vigna mungo
Zm00001eb227940 Zea mays

User provided reference genes

Program Settings