Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p33610 Brassica napus
Aa31LG1G22800 Aethionema arabicum
Actinidia13789 Actinidia chinensis
Actinidia29139 Actinidia chinensis
Ah.11g049550 Amaranthus hybridus
Ah.11g049570 Amaranthus hybridus
AL6G11040 Arabidopsis lyrata
Aqoxy1G00739 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5ZZ6F4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H8VZ0K Arachis hypogaea
AT5G01160 Arabidopsis thaliana
ATR0605G041 Amborella trichopoda
Atru.chr8.2134 Acer truncatum
Atru.chr8.2135 Acer truncatum
AUR62011861 Chenopodium quinoa
AUR62024704 Chenopodium quinoa
BcaB05g21942 Brassica carinata
BcaNung02762 Brassica carinata
BcaNung02766 Brassica carinata
BolC9t60186H Brassica oleracea
BraA10t45393Z Brassica rapa
C09p74540 Brassica napus
CAN.G284.13 Capsicum annuum
CANSAT35G1827 Cannabis sativa
CARHR211480 Cardamine hirsuta
Carub.0006s0073 Capsella rubella
Ca_09168_v3 Cicer arietinum L.
CBR_g24154 Chara braunii
Cc06_g01760 Coffea canephora
CDE03G0086 Ceratophyllum demersum
CDE04G3126 Ceratophyllum demersum
Cfa017262 Carpinus fangiana
Ciclev10011563m.g Citrus clementina
CiPaw.09G205000 Carya illinoinensis
ClCG10G021740 Citrullus lanatus
COL.COLO4_14619 Corchorus olitorius
Cpa.g.sc312.3 Carica papaya
CsaV3_3G034230 Cucumis sativus L.
CSS0020158 Camellia sinensis var. sinensis
CSS0030830 Camellia sinensis var. sinensis
DCAR_005589 Daucus carota
DCAR_008325 Daucus carota
Dinv03649 Davidia involucrata
Dinv37091 Davidia involucrata
Duzib093G0024 Durio zibethinus
Duzib106G1773 Durio zibethinus
Duzib128G1243 Durio zibethinus
ECA248G2096 Erigeron canadensis
EL10As5g23477 Beta vulgaris
Eucgr.B02762 Eucalyptus grandis
FAN02G3235 Fragaria x ananassa
FAN05G3392 Fragaria x ananassa
FAN09G0023 Fragaria x ananassa
FAN14G1666 Fragaria x ananassa
FAN14G2781 Fragaria x ananassa
FvH4_6g12190 Fragaria vesca
Glyma.07G144300 Glycine max
Glyma.18G195500 Glycine max
Glyma.18G195800 Glycine max
Gohir.A04G087700 Gossypium hirsutum
Gohir.A09G163000 Gossypium hirsutum
Gohir.D04G128100 Gossypium hirsutum
Gohir.D09G158500 Gossypium hirsutum
Gorai.006G180200 Gossypium raimondii
Gorai.012G111100 Gossypium raimondii
GSVIVG01034021001 Vitis vinifera
HanXRQChr13g0397571 Helianthus annuus
HanXRQChr13g0397921 Helianthus annuus
HanXRQChr13g0406371 Helianthus annuus
Haze_20938 Corylus avellana
Hma1.2p1_0125F.1_g058510 Hydrangea macrophylla
Hma1.2p1_0703F.1_g206335 Hydrangea macrophylla
HPP92_021066 Vanilla planifolia
Hund02920 Selenicereus undatus
Hund09607 Selenicereus undatus
Lalb_Chr01g0022881 Lupinus albus
Lalb_Chr03g0042941 Lupinus albus
Lj2A78G31 Lonicera japonica
Lj3g0024478 Lotus japonicus
Lsat_1_v5_gn_5_155380 Lactuca sativa
Manes.08G086900 Manihot esculenta
Mapoly0068s0057 Marchantia polymorpha
MBI06_g17209_MAGBIO Magnolia biondii
MD04G1145200 Malus domestica
MD12G1159000 Malus domestica
Medtr7g056183 Medicago truncatula
Medtr7g066710 Medicago truncatula
MELO3C009198.2 Cucumis melo
Migut.J00234 Erythranthe guttata
MSTRG.5603 Avicennia marina
Nitab4.5_0000008g0560 Nicotiana tabacum
Nitab4.5_0006254g0010 Nicotiana tabacum
Nn1g02852 Nelumbo nucifera
Oeu020881.1 Olea europaea
Oeu030537.4 Olea europaea
Oeu044369.1 Olea europaea
Oeu055280.1 Olea europaea
Os10g0494500 Oryza sativa ssp. japonica
Peaxi162Scf00141g00133 Petunia axillaris
PGR031G1436 Punica granatum
PGSC0003DMG400002411 Solanum tuberosum
PGSC0003DMG401020324 Solanum tuberosum
PGSC0003DMG402020324 Solanum tuberosum
Phvul.008G108800 Phaseolus vulgaris
Potri.006G095600 Populus trichocarpa
Pp3c20_10060 Physcomitrium patens
Pp3c23_4130 Physcomitrium patens
Pp3c8_18230 Physcomitrium patens
Prupe.6G269500 Prunus persica
Psat3g131000 Pisum sativum
PSO384G3148 Papaver somniferum
PSO585G0030 Papaver somniferum
QL07p036221 Quercus lobata
RcHm_v2.0_Chr3g0463991 Rosa chinensis
RcHm_v2.0_Chr3g0492291 Rosa chinensis
Rhsim01G0256700 Rhododendron simsii
Sabra06G0073400 Salix brachista
SalBow3G4061 Salvia bowleyana
Sc05g0000650 Simmondsia chinensis
Sed0007832 Sechium edule
SEGI_31043 Sequoiadendron giganteum
SGA_v2.0_scaffold75G24995 Striga asiatica
SGA_v2.0_scaffold85G26772 Striga asiatica
SHI12776 Sapria himalayana
Solyc09g013120.4 Solanum lycopersicum
Sopen01g013720 Solanum pennellii
Sopen01g013770 Solanum pennellii
Sopen09g006960 Solanum pennellii
Sp6g40520 Schrenkiella parvula
TAR633G0560 Trochodendron aralioides
TAR636G3085 Trochodendron aralioides
THA.LOC104827038 Tarenaya hassleriana
Thecc.05G023500 Theobroma cacao
Thhalv10014073m.g Eutrema salsugineum
TPR.G1557 Trifolium pratense
TWI74G0304 Tripterygium wilfordii
TWI77G0073 Tripterygium wilfordii
unitig_22.g6590 Utricularia gibba
vmacro01296 Vaccinium macrocarpon
VMungo1383G1762 Vigna mungo
Zm00001eb044800 Zea mays
Zm00001eb221140 Zea mays

User provided reference genes

Program Settings