Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p07350 Brassica napus
Aa31LG9G14260 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1810 Anthoceros agrestis
AL1G52440 Arabidopsis lyrata
AL6G42080 Arabidopsis lyrata
Aqoxy6G00187 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.F65TCR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SCI4MN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V8LFJN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y2U2DK Arachis hypogaea
AT1G44780 Arabidopsis thaliana
AT4G08310 Arabidopsis thaliana
ATR0104G007 Amborella trichopoda
Atru.chr13.1433 Acer truncatum
Atru.chr13.1434 Acer truncatum
AUR62019052 Chenopodium quinoa
AUR62027892 Chenopodium quinoa
BcaB07g33934 Brassica carinata
BcaC08g42867 Brassica carinata
BolC6t35219H Brassica oleracea
BraSC36t46079Z Brassica rapa
C06p00770 Brassica napus
CAN.G127.21 Capsicum annuum
CANSAT25G1794 Cannabis sativa
CARHR036040 Cardamine hirsuta
CARHR217500 Cardamine hirsuta
CARHR259390 Cardamine hirsuta
Carub.0001s3530 Capsella rubella
Carub.0006s2687 Capsella rubella
Ca_15194_v3 Cicer arietinum L.
CBR_g29492 Chara braunii
Cc00_g04310 Coffea canephora
CDE06G0823 Ceratophyllum demersum
CDE06G1231 Ceratophyllum demersum
CDE06G1640 Ceratophyllum demersum
Cfa016002 Carpinus fangiana
Ciclev10000938m.g Citrus clementina
CiPaw.05G223300 Carya illinoinensis
CiPaw.06G029200 Carya illinoinensis
ClCG08G005570 Citrullus lanatus
COL.COLO4_35946 Corchorus olitorius
Cpa.g.sc36.50 Carica papaya
Cpa.g.sc36.52 Carica papaya
Cre12.g539750 Chlamydomonas reinhardtii
CsaV3_2G014020 Cucumis sativus L.
CSS0006134 Camellia sinensis var. sinensis
CSS0023513 Camellia sinensis var. sinensis
DCAR_011614 Daucus carota
DCAR_011615 Daucus carota
Dinv27329 Davidia involucrata
Duzib093G2154 Durio zibethinus
Duzib116G0422 Durio zibethinus
ECA238G0419 Erigeron canadensis
EL10Ac1g01045 Beta vulgaris
EL10Ac8g19333 Beta vulgaris
Eucgr.F04357 Eucalyptus grandis
FAN15G2971 Fragaria x ananassa
FAN20G1264 Fragaria x ananassa
FAN24G2565 Fragaria x ananassa
FAN27G0453 Fragaria x ananassa
FvH4_2g26711 Fragaria vesca
Glyma.04G250500 Glycine max
Glyma.06G112300 Glycine max
Gohir.A05G234400 Gossypium hirsutum
Gohir.A06G043600 Gossypium hirsutum
Gohir.D05G236700 Gossypium hirsutum
Gohir.D06G044400 Gossypium hirsutum
Gorai.009G245100 Gossypium raimondii
Gorai.010G049600 Gossypium raimondii
GSVIVG01008886001 Vitis vinifera
HanXRQChr04g0109451 Helianthus annuus
Haze_00460 Corylus avellana
HPP92_011157 Vanilla planifolia
Hund27026 Selenicereus undatus
Lalb_Chr08g0241491 Lupinus albus
Lj1g0013612 Lotus japonicus
Lj4A622G14 Lonicera japonica
Lsat_1_v5_gn_5_101461 Lactuca sativa
Manes.18G076200 Manihot esculenta
Mapoly0004s0202 Marchantia polymorpha
MBI06_g20714_MAGBIO Magnolia biondii
MBI15_g19197_MAGBIO Magnolia biondii
MBI15_g20157_MAGBIO Magnolia biondii
MBI15_g20159_MAGBIO Magnolia biondii
MBI15_g24178_MAGBIO Magnolia biondii
MBI15_g42534_MAGBIO Magnolia biondii
MD00G1157400 Malus domestica
MD15G1351600 Malus domestica
Medtr3g072480 Medicago truncatula
MELO3C010600.2 Cucumis melo
Migut.F01876 Erythranthe guttata
MSTRG.326 Avicennia marina
Nitab4.5_0001273g0010 Nicotiana tabacum
Nitab4.5_0001273g0020 Nicotiana tabacum
Nitab4.5_0001273g0030 Nicotiana tabacum
Nitab4.5_0001803g0110 Nicotiana tabacum
Nitab4.5_0001803g0130 Nicotiana tabacum
Nn5g28219 Nelumbo nucifera
Nn8g40262 Nelumbo nucifera
Oeu062052.1 Olea europaea
Os11g0544600 Oryza sativa ssp. japonica
Peaxi162Scf00914g00033 Petunia axillaris
PGR044G2411 Punica granatum
Phvul.009G124200 Phaseolus vulgaris
Potri.002G085000 Populus trichocarpa
Potri.005G176400 Populus trichocarpa
Pp3c21_16190 Physcomitrium patens
Prupe.1G500200 Prunus persica
Psat5g132440 Pisum sativum
PSO170G1761 Papaver somniferum
PSO528G0270 Papaver somniferum
QL09p035410 Quercus lobata
RcHm_v2.0_Chr6g0295601 Rosa chinensis
RhsimUnG0093800 Rhododendron simsii
Sabra02G0066400 Salix brachista
Sabra05G0133000 Salix brachista
Sc01g0001210 Simmondsia chinensis
Sed0010827 Sechium edule
SEGI_25872 Sequoiadendron giganteum
SGA_v2.0_scaffold122G33176 Striga asiatica
SGA_v2.0_scaffold340G49301 Striga asiatica
SGA_v2.0_scaffold340G49302 Striga asiatica
SHI29459 Sapria himalayana
SMO230G0058 Selaginella moellendorffii
SMO230G0121 Selaginella moellendorffii
SMO367G1068 Selaginella moellendorffii
Solyc11g012920.3 Solanum lycopersicum
Sopen11g007660 Solanum pennellii
Sp1g33640 Schrenkiella parvula
Sp6g09690 Schrenkiella parvula
TAR625G0673 Trochodendron aralioides
THA.LOC104817273 Tarenaya hassleriana
Thecc.08G123400 Theobroma cacao
Thhalv10011453m.g Eutrema salsugineum
Thhalv10029139m.g Eutrema salsugineum
TPR.G24014 Trifolium pratense
TWI12G0790 Tripterygium wilfordii
TWI56G0611 Tripterygium wilfordii
unitig_52.g17510 Utricularia gibba
vmacro00824 Vaccinium macrocarpon
VMungo1309G2754 Vigna mungo
Zm00001eb113700 Zea mays

User provided reference genes

Program Settings