Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p36730 Brassica napus
A05p32220 Brassica napus
Aa31LG8G4490 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2525 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2527 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2528 Anthoceros agrestis
Actinidia39944 Actinidia chinensis
AL3G30690 Arabidopsis lyrata
Aqoxy2G00444 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.ETFP64 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XSBG43 Arachis hypogaea
AT3G17611 Arabidopsis thaliana
ATR0796G336 Amborella trichopoda
Atru.chr4.3195 Acer truncatum
AUR62022362 Chenopodium quinoa
AUR62034345 Chenopodium quinoa
BcaB04g20833 Brassica carinata
BcaB06g25831 Brassica carinata
BcaC05g28769 Brassica carinata
BcaC09g48719 Brassica carinata
BolC1t04628H Brassica oleracea
BolC5t33612H Brassica oleracea
BraA01t03734Z Brassica rapa
BraA05t22052Z Brassica rapa
C01p46630 Brassica napus
C05p48760 Brassica napus
CAN.G1337.25 Capsicum annuum
CAN.G1337.26 Capsicum annuum
CAN.G357.8 Capsicum annuum
CANSAT78G1361 Cannabis sativa
CARHR092930 Cardamine hirsuta
Carub.0003s1733 Capsella rubella
Ca_21356_v3 Cicer arietinum L.
CBR_g40142 Chara braunii
Cc04_g14300 Coffea canephora
CDE02G2900 Ceratophyllum demersum
CDE02G3498 Ceratophyllum demersum
CDE09G0037 Ceratophyllum demersum
Cfa015759 Carpinus fangiana
Cfa015762 Carpinus fangiana
Ciclev10021112m.g Citrus clementina
CiPaw.02G068200 Carya illinoinensis
ClCG04G002200 Citrullus lanatus
COL.COLO4_25111 Corchorus olitorius
Cpa.g.sc146.5 Carica papaya
Cre03.g144727 Chlamydomonas reinhardtii
Cre03.g204400 Chlamydomonas reinhardtii
CsaV3_4G030510 Cucumis sativus L.
CSS0044252 Camellia sinensis var. sinensis
DCAR_023424 Daucus carota
Dinv29491 Davidia involucrata
Duzib116G0935 Durio zibethinus
ECA246G2061 Erigeron canadensis
EL10Ac1g01664 Beta vulgaris
Eucgr.H04153 Eucalyptus grandis
FAN07G1699 Fragaria x ananassa
FAN12G4199 Fragaria x ananassa
FAN17G0053 Fragaria x ananassa
FvH4_4g21840 Fragaria vesca
Glyma.13G116600 Glycine max
Glyma.17G043300 Glycine max
Gohir.A01G135700 Gossypium hirsutum
Gohir.A01G140678 Gossypium hirsutum
Gohir.A06G072800 Gossypium hirsutum
Gohir.A08G228300 Gossypium hirsutum
Gohir.A10G195100 Gossypium hirsutum
Gohir.D08G248600 Gossypium hirsutum
Gorai.004G265200 Gossypium raimondii
GSVIVG01017718001 Vitis vinifera
HanXRQChr05g0148921 Helianthus annuus
Haze_00741 Corylus avellana
Haze_00742 Corylus avellana
Hma1.2p1_1067F.1_g253910 Hydrangea macrophylla
Hma1.2p1_3133F.1_g332970 Hydrangea macrophylla
Hma1.2p1_3133F.1_g332980 Hydrangea macrophylla
HPP92_012759 Vanilla planifolia
Hund17553 Selenicereus undatus
Lalb_Chr12g0200451 Lupinus albus
Lj2g0027327 Lotus japonicus
Lj6A705T54 Lonicera japonica
Lsat_1_v5_gn_0_37861 Lactuca sativa
Lsat_1_v5_gn_4_185280 Lactuca sativa
Lsat_1_v5_gn_6_61961 Lactuca sativa
Manes.12G155100 Manihot esculenta
Mapoly0061s0084 Marchantia polymorpha
MBI18_g03863_MAGBIO Magnolia biondii
MCO13G118 Micromonas commoda
MCO13G541 Micromonas commoda
MD13G1136300 Malus domestica
Medtr4g123573 Medicago truncatula
MELO3C008914.2 Cucumis melo
Migut.M00009 Erythranthe guttata
MSTRG.14933 Avicennia marina
Nitab4.5_0000019g0100 Nicotiana tabacum
Nitab4.5_0007722g0010 Nicotiana tabacum
Nn4g25269 Nelumbo nucifera
Oeu002498.1 Olea europaea
Os01g0283500 Oryza sativa ssp. japonica
Peaxi162Scf00322g00917 Petunia axillaris
Peaxi162Scf01347g00135 Petunia axillaris
PGR004G1856 Punica granatum
PGSC0003DMG400037053 Solanum tuberosum
PGSC0003DMG401013561 Solanum tuberosum
Phvul.003G125100 Phaseolus vulgaris
Potri.010G004600 Populus trichocarpa
Pp3c15_4650 Physcomitrium patens
Pp3c9_8740 Physcomitrium patens
PRCOL_00003251 Prasinoderma coloniale
Prupe.1G209100 Prunus persica
Psat4g020440 Pisum sativum
PSO210G1641 Papaver somniferum
PSO761G0146 Papaver somniferum
QL06p014836 Quercus lobata
RcHm_v2.0_Chr4g0428081 Rosa chinensis
Rhsim02G0049500 Rhododendron simsii
Sabra10G0004000 Salix brachista
SalBow7G1146 Salvia bowleyana
Sc10g0003710 Simmondsia chinensis
Sed0018181 Sechium edule
SEGI_08776 Sequoiadendron giganteum
SEGI_33584 Sequoiadendron giganteum
SEGI_37310 Sequoiadendron giganteum
SEGI_37450 Sequoiadendron giganteum
SEGI_40739 Sequoiadendron giganteum
SGA_v2.0_scaffold73G24528 Striga asiatica
SHI11368 Sapria himalayana
SMO367G0940 Selaginella moellendorffii
Solyc05g016380.4 Solanum lycopersicum
Solyc07g042930.3 Solanum lycopersicum
Sopen05g013630 Solanum pennellii
Sopen07g022530 Solanum pennellii
Sp3g15750 Schrenkiella parvula
TAR633G0169 Trochodendron aralioides
THA.LOC104821816 Tarenaya hassleriana
Thecc.08G167300 Theobroma cacao
Thhalv10021096m.g Eutrema salsugineum
TPR.G12683 Trifolium pratense
TWI73G0458 Tripterygium wilfordii
vmacro15495 Vaccinium macrocarpon
VMungo1215G2294 Vigna mungo
Zm00001eb227080 Zea mays
Zm00001eb332500 Zea mays

User provided reference genes

Program Settings