Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p38690 Brassica napus
A06p01290 Brassica napus
Aa31LG10G2070 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.196 Anthoceros agrestis
Actinidia35250 Actinidia chinensis
Ah.04g164870 Amaranthus hybridus
Ah.06g184190 Amaranthus hybridus
AL1G61380 Arabidopsis lyrata
AL3G27810 Arabidopsis lyrata
Aqoxy7G00104 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BBI5VM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I7TC1S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UV8WYD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XK3P9A Arachis hypogaea
AT1G53030 Arabidopsis thaliana
AT3G15352 Arabidopsis thaliana
ATR0568G005 Amborella trichopoda
ATR0736G058 Amborella trichopoda
AUR62019420 Chenopodium quinoa
BcaB07g33364 Brassica carinata
BcaC09g48499 Brassica carinata
BolC6t35949H Brassica oleracea
BraA06t23355Z Brassica rapa
C06p08730 Brassica napus
CAN.G162.62 Capsicum annuum
CAN.G199.4 Capsicum annuum
CARHR043250 Cardamine hirsuta
CARHR090370 Cardamine hirsuta
Carub.0001s4218 Capsella rubella
Carub.0003s1504 Capsella rubella
Ca_01841_v3 Cicer arietinum L.
Ca_24271_v3 Cicer arietinum L.
Cc05_g12050 Coffea canephora
CDE08G1336 Ceratophyllum demersum
Cfa020587 Carpinus fangiana
Ciclev10010072m.g Citrus clementina
CiPaw.11G169400 Carya illinoinensis
CiPaw.12G118100 Carya illinoinensis
ClCG10G006950 Citrullus lanatus
COL.COLO4_27168 Corchorus olitorius
Cpa.g.sc80.62 Carica papaya
Cre05.g232850 Chlamydomonas reinhardtii
CsaV3_3G006320 Cucumis sativus L.
CSS0006050 Camellia sinensis var. sinensis
CSS0040687 Camellia sinensis var. sinensis
CSS0042186 Camellia sinensis var. sinensis
DCAR_013105 Daucus carota
DCAR_017140 Daucus carota
Dinv03511 Davidia involucrata
Dinv04306 Davidia involucrata
Dinv20171 Davidia involucrata
Duzib268G0922 Durio zibethinus
ECA240G0949 Erigeron canadensis
EL10Ac4g08174 Beta vulgaris
Eucgr.F03316 Eucalyptus grandis
FAN11G1098 Fragaria x ananassa
FAN16G1707 Fragaria x ananassa
FAN25G2626 Fragaria x ananassa
FvH4_3g19981 Fragaria vesca
Glyma.06G242800 Glycine max
Glyma.12G154400 Glycine max
Gohir.A04G030400 Gossypium hirsutum
Gohir.A11G284900 Gossypium hirsutum
Gohir.D05G355700 Gossypium hirsutum
Gohir.D11G297800 Gossypium hirsutum
Gorai.007G322700 Gossypium raimondii
Gorai.009G388100 Gossypium raimondii
GSVIVG01014339001 Vitis vinifera
HanXRQChr12g0364261 Helianthus annuus
HanXRQChr13g0406971 Helianthus annuus
Hma1.2p1_0885F.1_g232590 Hydrangea macrophylla
Hma1.2p1_0898F.1_g234370 Hydrangea macrophylla
HPP92_010342 Vanilla planifolia
Lalb_Chr01g0006571 Lupinus albus
Lalb_Chr25g0286381 Lupinus albus
Lj3g0008482 Lotus japonicus
Lj5g0028047 Lotus japonicus
Lsat_1_v5_gn_6_15501 Lactuca sativa
Lsat_1_v5_gn_9_96160 Lactuca sativa
Manes.03G110400 Manihot esculenta
Manes.15G086800 Manihot esculenta
Mapoly0075s0017 Marchantia polymorpha
MBI03_g28426_MAGBIO Magnolia biondii
MBI06_g21936_MAGBIO Magnolia biondii
MCO06G059 Micromonas commoda
MD03G1227400 Malus domestica
MD03G1227600 Malus domestica
MD11G1246900 Malus domestica
Medtr0271s0050 Medicago truncatula
Medtr0648s0010 Medicago truncatula
Medtr1g092430 Medicago truncatula
MELO3C016512.2 Cucumis melo
Migut.H01937 Erythranthe guttata
Migut.M00807 Erythranthe guttata
Nitab4.5_0000207g0090 Nicotiana tabacum
Nitab4.5_0001336g0010 Nicotiana tabacum
Nitab4.5_0001796g0040 Nicotiana tabacum
Nitab4.5_0002383g0040 Nicotiana tabacum
Nn2g14920 Nelumbo nucifera
Nn7g36574 Nelumbo nucifera
Oeu011684.1 Olea europaea
Os02g0794600 Oryza sativa ssp. japonica
Os09g0420700 Oryza sativa ssp. japonica
Peaxi162Scf00027g00225 Petunia axillaris
Peaxi162Scf00069g01430 Petunia axillaris
PGR031G2765 Punica granatum
PGSC0003DMG400012418 Solanum tuberosum
PGSC0003DMG400025038 Solanum tuberosum
Phvul.004G175600 Phaseolus vulgaris
Potri.001G400000 Populus trichocarpa
Potri.011G119000 Populus trichocarpa
Pp3c15_5560 Physcomitrium patens
Prupe.4G181400 Prunus persica
Psat5g244480 Pisum sativum
Psat5g287360 Pisum sativum
PSO384G2174 Papaver somniferum
QL08p021806 Quercus lobata
RcHm_v2.0_Chr5g0033731 Rosa chinensis
Rhsim01G0293100 Rhododendron simsii
Rhsim06G0198800 Rhododendron simsii
Sabra16G0262400 Salix brachista
Sc03g0009970 Simmondsia chinensis
Sed0025683 Sechium edule
SEGI_39587 Sequoiadendron giganteum
SGA_v2.0_scaffold34G13815 Striga asiatica
SMO358G0354 Selaginella moellendorffii
Solyc07g063160.2 Solanum lycopersicum
Solyc10g007010.1 Solanum lycopersicum
Sopen07g031350 Solanum pennellii
Sopen10g002920 Solanum pennellii
Sp3g13580 Schrenkiella parvula
TAR629G0728 Trochodendron aralioides
THA.LOC104810475 Tarenaya hassleriana
THA.LOC104818076 Tarenaya hassleriana
Thecc.07G089400 Theobroma cacao
Thhalv10011917m.g Eutrema salsugineum
Thhalv10021884m.g Eutrema salsugineum
TPR.G39025 Trifolium pratense
TWI39G1034 Tripterygium wilfordii
unitig_26.g9534 Utricularia gibba
vmacro09532 Vaccinium macrocarpon
Zm00001eb312990 Zea mays

User provided reference genes

Program Settings