Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p40300 Brassica napus
Aa31LG8G460 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1722__1723 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1723 Anthoceros agrestis
Actinidia00844 Actinidia chinensis
Actinidia03651 Actinidia chinensis
Ah.06g181500 Amaranthus hybridus
AL3G25030 Arabidopsis lyrata
Aqoxy1G04296 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1R5J8M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LDHF9L Arachis hypogaea
AT3G13225 Arabidopsis thaliana
ATR0751G017 Amborella trichopoda
Atru.chr2.3836 Acer truncatum
AUR62017130 Chenopodium quinoa
AUR62035679 Chenopodium quinoa
BcaB04g21006 Brassica carinata
BcaC09g48295 Brassica carinata
BolC1t05130H Brassica oleracea
BraA01t04066Z Brassica rapa
C01p51820 Brassica napus
CAN.G492.50 Capsicum annuum
CANSAT11G0508 Cannabis sativa
CARHR087840 Cardamine hirsuta
Carub.0003s1261 Capsella rubella
Ca_12455_v3 Cicer arietinum L.
CBR_g12012 Chara braunii
Cc05_g15290 Coffea canephora
CDE05G0998 Ceratophyllum demersum
CDE05G2589 Ceratophyllum demersum
Cfa021891 Carpinus fangiana
Ciclev10007493m.g Citrus clementina
CiPaw.12G140700 Carya illinoinensis
CiPaw.12G140800 Carya illinoinensis
ClCG09G021540 Citrullus lanatus
COL.COLO4_07741 Corchorus olitorius
Cpa.g.sc12.108 Carica papaya
Cre09.g388430 Chlamydomonas reinhardtii
CsaV3_7G023840 Cucumis sativus L.
CSS0028997 Camellia sinensis var. sinensis
CSS0029070 Camellia sinensis var. sinensis
CSS0030315 Camellia sinensis var. sinensis
CSS0045517 Camellia sinensis var. sinensis
DCAR_013254 Daucus carota
Dinv10361 Davidia involucrata
Dinv10362 Davidia involucrata
Dinv40885 Davidia involucrata
Duzib213G0009 Durio zibethinus
ECA236G3149 Erigeron canadensis
ECA240G3950 Erigeron canadensis
EL10Ac4g07541 Beta vulgaris
Eucgr.F02026 Eucalyptus grandis
FAN11G1247 Fragaria x ananassa
FAN16G2746 Fragaria x ananassa
FAN21G2745 Fragaria x ananassa
FAN25G1298 Fragaria x ananassa
FvH4_3g42241 Fragaria vesca
Glyma.08G332700 Glycine max
Glyma.18G074300 Glycine max
Gohir.A04G005700 Gossypium hirsutum
Gohir.D05G384000 Gossypium hirsutum
Gorai.009G450800 Gossypium raimondii
GSVIVG01014743001 Vitis vinifera
HanXRQChr11g0334131 Helianthus annuus
Haze_09867 Corylus avellana
Hma1.2p1_0193F.1_g083920 Hydrangea macrophylla
Hma1.2p1_3473F.1_g336230 Hydrangea macrophylla
Hma1.2p1_3473F.1_g336240 Hydrangea macrophylla
HPP92_017874 Vanilla planifolia
HPP92_028497 Vanilla planifolia
HPP92_028498 Vanilla planifolia
HPP92_028499 Vanilla planifolia
HPP92_028500 Vanilla planifolia
Hund23091 Selenicereus undatus
Lalb_Chr15g0082311 Lupinus albus
Lj6g0009098 Lotus japonicus
Lj8A180G96 Lonicera japonica
Lsat_1_v5_gn_3_17641 Lactuca sativa
Lsat_1_v5_gn_6_88041 Lactuca sativa
Lsat_1_v5_gn_7_114900 Lactuca sativa
Manes.01G003500 Manihot esculenta
MBI14_g27041_MAGBIO Magnolia biondii
MBI14_g37362_MAGBIO Magnolia biondii
MCO09G310 Micromonas commoda
MD03G1035400 Malus domestica
MD03G1035500 Malus domestica
MD11G1037100 Malus domestica
Medtr3g461030 Medicago truncatula
MELO3C024969.2 Cucumis melo
Migut.M01635 Erythranthe guttata
MSTRG.15808 Avicennia marina
Nitab4.5_0003328g0090 Nicotiana tabacum
Nitab4.5_0005478g0030 Nicotiana tabacum
Nn1g02046 Nelumbo nucifera
Nn3g19476 Nelumbo nucifera
Oeu017994.1 Olea europaea
Oeu017995.1 Olea europaea
Oeu027265.1 Olea europaea
Oeu049420.1 Olea europaea
Os06g0298400 Oryza sativa ssp. japonica
Peaxi162Scf00018g00154 Petunia axillaris
Peaxi162Scf00018g00155 Petunia axillaris
PGR083G0334 Punica granatum
PGSC0003DMG400014404 Solanum tuberosum
Phvul.006G059260 Phaseolus vulgaris
Potri.001G371600 Populus trichocarpa
Pp3c7_8580 Physcomitrium patens
Prupe.6G028400 Prunus persica
Psat2g169600 Pisum sativum
Psat5g166400 Pisum sativum
Psat7g003240 Pisum sativum
PSO210G4843 Papaver somniferum
PSO210G4950 Papaver somniferum
PSO782G1978 Papaver somniferum
PSO782G2183 Papaver somniferum
QL08p002685 Quercus lobata
RcHm_v2.0_Chr5g0075561 Rosa chinensis
RcHm_v2.0_Chr5g0075571 Rosa chinensis
Rhsim04G0010500 Rhododendron simsii
Sabra16G0244200 Salix brachista
SalBow8G3039 Salvia bowleyana
Sc03g0011530 Simmondsia chinensis
Sed0019267 Sechium edule
SEGI_31992 Sequoiadendron giganteum
SGA_v2.0_scaffold168G38576 Striga asiatica
SMO164G0196 Selaginella moellendorffii
Solyc10g005850.4 Solanum lycopersicum
Solyc10g005860.3 Solanum lycopersicum
Sopen10g001810 Solanum pennellii
Sp3g11430 Schrenkiella parvula
TAR626G0279 Trochodendron aralioides
THA.LOC104815687 Tarenaya hassleriana
Thecc.07G007900 Theobroma cacao
Thhalv10020110m.g Eutrema salsugineum
TPR.G17956 Trifolium pratense
TWI38G1324 Tripterygium wilfordii
TWI38G2212 Tripterygium wilfordii
unitig_0.g707 Utricularia gibba
vmacro09623 Vaccinium macrocarpon
VMungo0540G1402 Vigna mungo
Zm00001eb281160 Zea mays
Zm00001eb381020 Zea mays

User provided reference genes

Program Settings