Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p27390 Brassica napus
Aa31LG9G10660 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1868 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2662 Anthoceros agrestis
Actinidia05223 Actinidia chinensis
Ah.06g194640 Amaranthus hybridus
AL6G46320 Arabidopsis lyrata
AL6G46446 Arabidopsis lyrata
Aqoxy7G00422 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0CNS1F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AXGL4F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C7APUF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SKE7H3 Arachis hypogaea
AT4G11720 Arabidopsis thaliana
ATR0757G099 Amborella trichopoda
ATR0757G119 Amborella trichopoda
Atru.chr9.1551 Acer truncatum
AUR62000197 Chenopodium quinoa
AUR62000200 Chenopodium quinoa
AUR62006548 Chenopodium quinoa
AUR62037708 Chenopodium quinoa
BcaB01g01675 Brassica carinata
BcaB05g23815 Brassica carinata
BolC9t56320H Brassica oleracea
BraA09t38310Z Brassica rapa
C06p31100 Brassica napus
C09p34740 Brassica napus
CAN.G981.21 Capsicum annuum
CANSAT21G2165 Cannabis sativa
CARHR254650 Cardamine hirsuta
Carub.0006s3081 Capsella rubella
Ca_06657_v3 Cicer arietinum L.
CBR_g19301 Chara braunii
CBR_g31110 Chara braunii
CBR_g9145 Chara braunii
Cc08_g14090 Coffea canephora
Cfa012113 Carpinus fangiana
Ciclev10019148m.g Citrus clementina
CiPaw.11G140300 Carya illinoinensis
ClCG01G003080 Citrullus lanatus
COL.COLO4_05261 Corchorus olitorius
Cpa.g.sc29.190 Carica papaya
Cre16.g674852 Chlamydomonas reinhardtii
CsaV3_5G003200 Cucumis sativus L.
CsaV3_6G021380 Cucumis sativus L.
CSS0016729 Camellia sinensis var. sinensis
DCAR_006756 Daucus carota
Dinv39001 Davidia involucrata
Duzib068G0163 Durio zibethinus
ECA240G2378 Erigeron canadensis
EL10Ac4g10111 Beta vulgaris
Eucgr.D01915 Eucalyptus grandis
FAN04G2632 Fragaria x ananassa
FAN04G3017 Fragaria x ananassa
FAN08G1421 Fragaria x ananassa
FAN08G1570 Fragaria x ananassa
FAN08G2219 Fragaria x ananassa
FAN13G0849 Fragaria x ananassa
FAN13G3003 Fragaria x ananassa
FAN18G0890 Fragaria x ananassa
FAN18G1071 Fragaria x ananassa
FvH4_5g01630 Fragaria vesca
FvH4_5g01650 Fragaria vesca
FvH4_5g28890 Fragaria vesca
Glyma.01G216933 Glycine max
Glyma.09G081380 Glycine max
Glyma.09G081420 Glycine max
Glyma.09G081600 Glycine max
Glyma.11G026100 Glycine max
Glyma.11G026250 Glycine max
Glyma.11G176306 Glycine max
Glyma.15G240000 Glycine max
Gohir.A11G021400 Gossypium hirsutum
Gohir.D11G021100 Gossypium hirsutum
Gohir.D11G021150 Gossypium hirsutum
Gorai.007G022400 Gossypium raimondii
GSVIVG01019819001 Vitis vinifera
HanXRQChr02g0035411 Helianthus annuus
HanXRQChr11g0339471 Helianthus annuus
Haze_08938 Corylus avellana
HPP92_004952 Vanilla planifolia
Hund02677 Selenicereus undatus
Hund02678 Selenicereus undatus
Lalb_Chr16g0377191 Lupinus albus
Lj2g0017844 Lotus japonicus
Lj8A237G27 Lonicera japonica
Lj8C237T7 Lonicera japonica
Lsat_1_v5_gn_3_5380 Lactuca sativa
Manes.01G066000 Manihot esculenta
Manes.02G025740 Manihot esculenta
Mapoly0035s0066 Marchantia polymorpha
Mapoly0066s0032 Marchantia polymorpha
MapolyY_A0059 Marchantia polymorpha
MBI04_g31964_MAGBIO Magnolia biondii
MBI04_g31975_MAGBIO Magnolia biondii
MD04G1066100 Malus domestica
Medtr5g010740 Medicago truncatula
MELO3C005635.2 Cucumis melo
Migut.E01288 Erythranthe guttata
MSTRG.13824 Avicennia marina
Nitab4.5_0002234g0010 Nicotiana tabacum
Nitab4.5_0002853g0050 Nicotiana tabacum
Nn6g34225 Nelumbo nucifera
Os05g0269500 Oryza sativa ssp. japonica
Os09g0525700 Oryza sativa ssp. japonica
Peaxi162Scf00714g00422 Petunia axillaris
Peaxi162Scf00714g00430 Petunia axillaris
PGR031G1121 Punica granatum
PGSC0003DMG400003049 Solanum tuberosum
Phvul.002G154300 Phaseolus vulgaris
Potri.001G109000 Populus trichocarpa
Pp3c25_15230 Physcomitrium patens
Prupe.5G092400 Prunus persica
Prupe.8G039400 Prunus persica
Prupe.8G039500 Prunus persica
Psat2g181800 Pisum sativum
PSO478G3496 Papaver somniferum
PSO782G2170 Papaver somniferum
QL12p017446 Quercus lobata
RcHm_v2.0_Chr4g0410761 Rosa chinensis
RcHm_v2.0_Chr7g0199071 Rosa chinensis
Rhsim07G0093800 Rhododendron simsii
Sabra01G0082300 Salix brachista
SalBow1G6288 Salvia bowleyana
Sc05g0000210 Simmondsia chinensis
Sed0022971 Sechium edule
SGA_v2.0_scaffold144G35970 Striga asiatica
SHI23548 Sapria himalayana
Solyc08g080450.3 Solanum lycopersicum
Sopen08g028770 Solanum pennellii
Sp6g05730 Schrenkiella parvula
TAR375G0646 Trochodendron aralioides
THA.LOC104813014 Tarenaya hassleriana
Thecc.03G272300 Theobroma cacao
Thhalv10028515m.g Eutrema salsugineum
TPR.G6715 Trifolium pratense
TWI15G0275 Tripterygium wilfordii
unitig_26.g9696 Utricularia gibba
vmacro13927 Vaccinium macrocarpon
VMungo1215G1628 Vigna mungo
VMungo1215G1946 Vigna mungo
Zm00001eb103180 Zea mays

User provided reference genes

Program Settings