Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p06120 Brassica napus
Aa31sc144G60 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2268 Anthoceros agrestis
Actinidia17237 Actinidia chinensis
Actinidia38547 Actinidia chinensis
Ah.13g076460 Amaranthus hybridus
AL6G24240 Arabidopsis lyrata
Aqoxy2G00152 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.RSU8B2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XR90DA Arachis hypogaea
AT5G13630 Arabidopsis thaliana
ATR0626G393 Amborella trichopoda
Atru.chr1.1096 Acer truncatum
AUR62024447 Chenopodium quinoa
AUR62026037 Chenopodium quinoa
BcaB01g05344 Brassica carinata
BcaB01g05345 Brassica carinata
BolC3t13211H Brassica oleracea
BraA03t09944Z Brassica rapa
C03p07120 Brassica napus
CAN.G676.69 Capsicum annuum
CARHR199810 Cardamine hirsuta
Carub.0006s1179 Capsella rubella
Ca_26018_v3 Cicer arietinum L.
CBR_g40549 Chara braunii
CBR_g6691 Chara braunii
Cc06_g17100 Coffea canephora
CDE05G2234 Ceratophyllum demersum
CDE07G0141 Ceratophyllum demersum
Cfa016819 Carpinus fangiana
Ciclev10004154m.g Citrus clementina
CiPaw.10G033300 Carya illinoinensis
ClCG04G000090 Citrullus lanatus
COL.COLO4_28282 Corchorus olitorius
Cpa.g.sc92.51 Carica papaya
Cre07.g325500 Chlamydomonas reinhardtii
Cre11.g477625 Chlamydomonas reinhardtii
CsaV3_4G011730 Cucumis sativus L.
CSS0016317 Camellia sinensis var. sinensis
DCAR_013602 Daucus carota
Dinv12481 Davidia involucrata
Dinv39601 Davidia involucrata
Duzib093G0142 Durio zibethinus
Duzib128G0418 Durio zibethinus
ECA247G2461 Erigeron canadensis
EL10Ac3g07089 Beta vulgaris
Eucgr.A02348 Eucalyptus grandis
FAN02G3940 Fragaria x ananassa
FAN05G5756 Fragaria x ananassa
FAN09G2062 Fragaria x ananassa
FAN14G0383 Fragaria x ananassa
FAN15G2164 Fragaria x ananassa
FvH4_6g23800 Fragaria vesca
Glyma.03G137000 Glycine max
Glyma.10G097800 Glycine max
Glyma.19G139300 Glycine max
Gohir.A09G122100 Gossypium hirsutum
Gohir.D09G118200 Gossypium hirsutum
Gorai.006G136500 Gossypium raimondii
GSVIVG01033277001 Vitis vinifera
HanXRQChr10g0288781 Helianthus annuus
HanXRQChr10g0296641 Helianthus annuus
Haze_19858 Corylus avellana
Hma1.2p1_2002F.1_g310730 Hydrangea macrophylla
Hma1.2p1_2002F.1_g310740 Hydrangea macrophylla
HPP92_012089 Vanilla planifolia
Hund05283 Selenicereus undatus
Lalb_Chr20g0110491 Lupinus albus
Lalb_Chr25g0287111 Lupinus albus
Lj1g0017211 Lotus japonicus
Lju124A41T48 Lonicera japonica
Lju124C41T11 Lonicera japonica
Lsat_1_v5_gn_5_109040 Lactuca sativa
Lsat_1_v5_gn_9_29020 Lactuca sativa
Lsat_1_v5_gn_9_29121 Lactuca sativa
Manes.08G050600 Manihot esculenta
Mapoly0008s0194 Marchantia polymorpha
MBI17_g13973_MAGBIO Magnolia biondii
MCO07G263 Micromonas commoda
MCO07G355 Micromonas commoda
MD03G1176300 Malus domestica
MD09G1118200 Malus domestica
MD12G1073700 Malus domestica
MD14G1072000 Malus domestica
MELO3C023131.2 Cucumis melo
Migut.J01759 Erythranthe guttata
MSTRG.10814 Avicennia marina
Nitab4.5_0005195g0040 Nicotiana tabacum
Nitab4.5_0010636g0020 Nicotiana tabacum
Nn2g10425 Nelumbo nucifera
Nn2g15252 Nelumbo nucifera
Nn7g36276 Nelumbo nucifera
Nn7g36281 Nelumbo nucifera
Oeu008920.1 Olea europaea
Oeu017946.1 Olea europaea
Os07g0656500 Oryza sativa ssp. japonica
Peaxi162Scf00130g00022 Petunia axillaris
PGR004G1765 Punica granatum
PGSC0003DMG400027276 Solanum tuberosum
Phvul.001G132200 Phaseolus vulgaris
Phvul.007G252700 Phaseolus vulgaris
Potri.006G051100 Populus trichocarpa
Pp3c10_13960 Physcomitrium patens
Pp3c10_13970 Physcomitrium patens
Pp3c5_16660 Physcomitrium patens
PRCOL_00001535 Prasinoderma coloniale
Prupe.7G024600 Prunus persica
Prupe.7G061100 Prunus persica
Psat6g120040 Pisum sativum
PSO339G0901 Papaver somniferum
PSO384G4351 Papaver somniferum
QL07p000318 Quercus lobata
RcHm_v2.0_Chr3g0482331 Rosa chinensis
Rhsim04G0102500 Rhododendron simsii
Sabra06G0035800 Salix brachista
SalBow6G2907 Salvia bowleyana
Sc04g0002790 Simmondsia chinensis
Sed0003738 Sechium edule
SEGI_14472 Sequoiadendron giganteum
SGA_v2.0_scaffold105G30411 Striga asiatica
SMO347G0130 Selaginella moellendorffii
Solyc04g015750.3 Solanum lycopersicum
Sopen04g007830 Solanum pennellii
Sp6g30390 Schrenkiella parvula
TAR369G0767 Trochodendron aralioides
TAR369G0825 Trochodendron aralioides
TAR465G0003 Trochodendron aralioides
TAR623G0733 Trochodendron aralioides
TAR623G1548 Trochodendron aralioides
Thecc.05G153600 Theobroma cacao
Thhalv10012443m.g Eutrema salsugineum
TPR.G10615 Trifolium pratense
TPR.G20810 Trifolium pratense
TPR.G25646 Trifolium pratense
TPR.G7382 Trifolium pratense
TWI53G0247 Tripterygium wilfordii
unitig_578.g15983 Utricularia gibba
vmacro09075 Vaccinium macrocarpon
VMungo1383G0107 Vigna mungo
Zm00001eb066400 Zea mays
Zm00001eb066410 Zea mays
Zm00001eb433610 Zea mays

User provided reference genes

Program Settings