Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia01009 Actinidia chinensis
Actinidia07784 Actinidia chinensis
Actinidia13637 Actinidia chinensis
Actinidia31637 Actinidia chinensis
Ah.11g042470 Amaranthus hybridus
Aqoxy4G03281 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0QV8DZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A39QJ2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DZPX8Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E2ZVAX Arachis hypogaea
Atru.chr10.2347 Acer truncatum
Atru.chr12.192 Acer truncatum
AUR62024949 Chenopodium quinoa
AUR62030590 Chenopodium quinoa
CAN.G1229.5 Capsicum annuum
CANSAT56G0683 Cannabis sativa
Ca_16857_v3 Cicer arietinum L.
Ca_23243_v3 Cicer arietinum L.
Ca_29505_v3 Cicer arietinum L.
Cc02_g05190 Coffea canephora
Ciclev10030619m.g Citrus clementina
CiPaw.01G307600 Carya illinoinensis
ClCG11G005600 Citrullus lanatus
COL.COLO4_19477 Corchorus olitorius
Cpa.g.sc19.39 Carica papaya
CsaV3_6G002400 Cucumis sativus L.
CSS0024314 Camellia sinensis var. sinensis
CSS0033913 Camellia sinensis var. sinensis
DCAR_009470 Daucus carota
DCAR_018044 Daucus carota
DCAR_020155 Daucus carota
Dinv21859 Davidia involucrata
Dinv34499 Davidia involucrata
Duzib106G0455 Durio zibethinus
Duzib114G0792 Durio zibethinus
Duzib128G0800 Durio zibethinus
ECA238G0953 Erigeron canadensis
EL10Ac5g10466 Beta vulgaris
Eucgr.G03149 Eucalyptus grandis
Eucgr.J00102 Eucalyptus grandis
FAN01G1672 Fragaria x ananassa
FAN06G3940 Fragaria x ananassa
FAN10G1366 Fragaria x ananassa
FvH4_7g26160 Fragaria vesca
Glyma.02G219400 Glycine max
Glyma.06G141400 Glycine max
Glyma.14G186800 Glycine max
Gohir.A05G404400 Gossypium hirsutum
Gohir.A10G177500 Gossypium hirsutum
Gohir.A13G007900 Gossypium hirsutum
Gohir.D04G011300 Gossypium hirsutum
Gohir.D10G184100 Gossypium hirsutum
Gohir.D13G008100 Gossypium hirsutum
Gorai.011G206300 Gossypium raimondii
Gorai.012G013500 Gossypium raimondii
Gorai.013G008500 Gossypium raimondii
GSVIVG01032655001 Vitis vinifera
HanXRQChr07g0204951 Helianthus annuus
HanXRQChr13g0400051 Helianthus annuus
HanXRQChr14g0460501 Helianthus annuus
Haze_17372 Corylus avellana
HPP92_022866 Vanilla planifolia
HPP92_024982 Vanilla planifolia
Hund13436 Selenicereus undatus
Hund15794 Selenicereus undatus
Lalb_Chr08g0239261 Lupinus albus
Lalb_Chr10g0102841 Lupinus albus
Lalb_Chr11g0067691 Lupinus albus
Lj1A968T60 Lonicera japonica
Lj1g0012895 Lotus japonicus
Lj8C52G6 Lonicera japonica
Lj8C52G7 Lonicera japonica
LjContig00408g0007312 Lotus japonicus
Lsat_1_v5_gn_2_126680 Lactuca sativa
Manes.07G142000 Manihot esculenta
Manes.10G003400 Manihot esculenta
MD01G1169800 Malus domestica
MD01G1169900 Malus domestica
MD07G1235500 Malus domestica
Medtr3g093780 Medicago truncatula
Medtr5g068060 Medicago truncatula
Medtr7g107300 Medicago truncatula
MELO3C020021.2 Cucumis melo
Migut.F00566 Erythranthe guttata
MSTRG.27252 Avicennia marina
MSTRG.8382 Avicennia marina
Nitab4.5_0000171g0310 Nicotiana tabacum
Nitab4.5_0005979g0010 Nicotiana tabacum
Nn2g10264 Nelumbo nucifera
Nn5g26827 Nelumbo nucifera
Oeu006068.1 Olea europaea
Oeu018746.1 Olea europaea
Oeu018747.2 Olea europaea
Oeu039387.1 Olea europaea
Oeu064002.1 Olea europaea
Peaxi162Scf00073g00227 Petunia axillaris
PGR044G0353 Punica granatum
PGR142G1797 Punica granatum
PGSC0003DMG400022956 Solanum tuberosum
Phvul.008G186500 Phaseolus vulgaris
Phvul.009G042600 Phaseolus vulgaris
Potri.019G061400 Populus trichocarpa
Prupe.2G265800 Prunus persica
Prupe.4G213000 Prunus persica
Psat2g061880 Pisum sativum
Psat5g069400 Pisum sativum
Psat6g112960 Pisum sativum
PSO017G7165 Papaver somniferum
PSO170G1015 Papaver somniferum
QL08p065100 Quercus lobata
RcHm_v2.0_Chr1g0372591 Rosa chinensis
Rhsim03G0153800 Rhododendron simsii
Rhsim05G0036500 Rhododendron simsii
Rhsim09G0186300 Rhododendron simsii
Sabra19G0075200 Salix brachista
SalBow3G3781 Salvia bowleyana
Sc10g0003070 Simmondsia chinensis
Sed0004419 Sechium edule
Sed0015893 Sechium edule
SGA_v2.0_scaffold44G16618 Striga asiatica
SGA_v2.0_scaffold60G20878 Striga asiatica
Solyc03g095610.4 Solanum lycopersicum
Sopen03g025560 Solanum pennellii
TAR369G0882 Trochodendron aralioides
TAR623G1626 Trochodendron aralioides
TAR633G2169 Trochodendron aralioides
TAR636G0005 Trochodendron aralioides
TAR636G2104 Trochodendron aralioides
Thecc.10G185200 Theobroma cacao
TPR.G13957 Trifolium pratense
TPR.G33934 Trifolium pratense
TPR.G33944 Trifolium pratense
TPR.G33951 Trifolium pratense
TWI09G1031 Tripterygium wilfordii
TWI53G1830 Tripterygium wilfordii
unitig_37.g11914 Utricularia gibba
unitig_37.g12476 Utricularia gibba
unitig_37.g12477 Utricularia gibba
unitig_46.g18752 Utricularia gibba
vmacro06904 Vaccinium macrocarpon
vmacro09953 Vaccinium macrocarpon
VMungo1309G1748 Vigna mungo

User provided reference genes

Program Settings