Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p36160 Brassica napus
A09p36200 Brassica napus
Aa31LG6G5450 Aethionema arabicum
Actinidia07466 Actinidia chinensis
Actinidia13442 Actinidia chinensis
Ah.01g015050 Amaranthus hybridus
AL1G44240 Arabidopsis lyrata
Aqoxy6G00107 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1U5Z8B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2X8K7H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E35D1F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QR7D30 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RN8PQ8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S6HMEC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W21Z3V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WGPX7I Arachis hypogaea
AT1G30290 Arabidopsis thaliana
ATR1098G077 Amborella trichopoda
Atru.BG.302.p Acer truncatum
Atru.chr10.1089 Acer truncatum
AUR62017465 Chenopodium quinoa
AUR62025016 Chenopodium quinoa
BcaB03g13836 Brassica carinata
BcaB07g32630 Brassica carinata
BcaB07g32639 Brassica carinata
BcaC05g27058 Brassica carinata
BcaC05g27061 Brassica carinata
BolC5t31646H Brassica oleracea
BolC5t31647H Brassica oleracea
BolC5t31652H Brassica oleracea
BraA09t39143Z Brassica rapa
BraA09t39145Z Brassica rapa
C05p29160 Brassica napus
C05p29200 Brassica napus
CAN.G328.9 Capsicum annuum
CAN.G36.12 Capsicum annuum
CAN.G36.25 Capsicum annuum
CANSAT35G0686 Cannabis sativa
CARHR029680 Cardamine hirsuta
Carub.0001s2852 Capsella rubella
Ca_00508_v3 Cicer arietinum L.
Cc11_g05070 Coffea canephora
CDE02G1473 Ceratophyllum demersum
CDE05G0694 Ceratophyllum demersum
Cfa000900 Carpinus fangiana
Cfa000901 Carpinus fangiana
Ciclev10014263m.g Citrus clementina
CiPaw.09G119800 Carya illinoinensis
ClCG01G024880 Citrullus lanatus
COL.COLO4_31011 Corchorus olitorius
Cpa.g.sc17.49 Carica papaya
CsaV3_6G052010 Cucumis sativus L.
CsaV3_6G052020 Cucumis sativus L.
CSS0008957 Camellia sinensis var. sinensis
DCAR_004624 Daucus carota
Dinv21523 Davidia involucrata
Duzib235G0011 Durio zibethinus
ECA236G3236 Erigeron canadensis
EL10Ac9g22478 Beta vulgaris
Eucgr.E02454 Eucalyptus grandis
FAN11G2722 Fragaria x ananassa
FAN11G3121 Fragaria x ananassa
FAN16G3117 Fragaria x ananassa
FAN21G0118 Fragaria x ananassa
FAN21G3303 Fragaria x ananassa
FAN25G3288 Fragaria x ananassa
FvH4_3g05050 Fragaria vesca
Glyma.13G221600 Glycine max
Glyma.15G090700 Glycine max
Gohir.A10G043900 Gossypium hirsutum
Gohir.D10G045100 Gossypium hirsutum
Gorai.011G048000 Gossypium raimondii
GSVIVG01021547001 Vitis vinifera
HanXRQChr04g0116581 Helianthus annuus
Haze_05675 Corylus avellana
HPP92_001621 Vanilla planifolia
HPP92_001622 Vanilla planifolia
Hund17688 Selenicereus undatus
Lalb_Chr15g0086601 Lupinus albus
Lj2C569T6 Lonicera japonica
Lj6g0017822 Lotus japonicus
Lsat_1_v5_gn_7_27480 Lactuca sativa
Manes.01G172900 Manihot esculenta
MBI18_g11220_MAGBIO Magnolia biondii
MD05G1279600 Malus domestica
MD05G1279700 Malus domestica
MD10G1258300 Malus domestica
Medtr2g018550 Medicago truncatula
Medtr2g018580 Medicago truncatula
MELO3C007107.2 Cucumis melo
Migut.M00881 Erythranthe guttata
MSTRG.7512 Avicennia marina
Nitab4.5_0000258g0100 Nicotiana tabacum
Nitab4.5_0000258g0110 Nicotiana tabacum
Nitab4.5_0000315g0050 Nicotiana tabacum
Nitab4.5_0002071g0050 Nicotiana tabacum
Nn3g20334 Nelumbo nucifera
Oeu032720.1 Olea europaea
Os12g0615600 Oryza sativa ssp. japonica
Peaxi162Scf00045g00242 Petunia axillaris
PGR035G0002 Punica granatum
PGSC0003DMG400002287 Solanum tuberosum
Phvul.006G168127 Phaseolus vulgaris
Potri.011G082300 Populus trichocarpa
Prupe.4G085500 Prunus persica
Psat3g019680 Pisum sativum
PSO384G4021 Papaver somniferum
QL05p055125 Quercus lobata
QL07p034390 Quercus lobata
RcHm_v2.0_Chr3g0490541 Rosa chinensis
RcHm_v2.0_Chr3g0490551 Rosa chinensis
RcHm_v2.0_Chr5g0014911 Rosa chinensis
Rhsim09G0050900 Rhododendron simsii
Rhsim09G0051100 Rhododendron simsii
Rhsim09G0051200 Rhododendron simsii
Rhsim13G0117400 Rhododendron simsii
Sabra11G0065300 Salix brachista
SalBow8G2351 Salvia bowleyana
Sc05g0005990 Simmondsia chinensis
Sc05g0006000 Simmondsia chinensis
Sed0025020 Sechium edule
SEGI_04521 Sequoiadendron giganteum
SEGI_16657 Sequoiadendron giganteum
SEGI_28981 Sequoiadendron giganteum
SEGI_37079 Sequoiadendron giganteum
SGA_v2.0_scaffold223G42824 Striga asiatica
SHI24905 Sapria himalayana
Solyc08g023490.4 Solanum lycopersicum
Sopen08g008640 Solanum pennellii
Sp1g26130 Schrenkiella parvula
TAR624G0614 Trochodendron aralioides
TAR624G0810 Trochodendron aralioides
TAR624G0918 Trochodendron aralioides
THA.LOC104820664 Tarenaya hassleriana
Thecc.06G144500 Theobroma cacao
Thhalv10006807m.g Eutrema salsugineum
TPR.G4722 Trifolium pratense
TWI73G0840 Tripterygium wilfordii
unitig_37.g12089 Utricularia gibba
vmacro03433 Vaccinium macrocarpon
VMungo0540G1354 Vigna mungo
Zm00001eb134800 Zea mays

User provided reference genes

Program Settings