Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p06080 Brassica napus
A03p09910 Brassica napus
Aa31LG1G14430 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.103 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.112 Anthoceros agrestis
AL5G13030 Arabidopsis lyrata
AL6G31740 Arabidopsis lyrata
Aqoxy7G03689 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.83L7WY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U3NP9C Arachis hypogaea
AT5G20180 Arabidopsis thaliana
ATCG00760 Arabidopsis thaliana
ATR0618G145 Amborella trichopoda
Atru.chr1.953 Acer truncatum
AUR62011139 Chenopodium quinoa
AUR62013349 Chenopodium quinoa
BcaB05g22866 Brassica carinata
BcaC03g13741 Brassica carinata
BNapus_Darmor_BZH_scaffold_38p01760 Brassica napus
BolC2t07023H Brassica oleracea
BolC3t13621H Brassica oleracea
BolC7t41709H Brassica oleracea
BolSC29t60528H Brassica oleracea
BolSC29t60609H Brassica oleracea
BolSC35t60669H Brassica oleracea
BolSC35t60730H Brassica oleracea
BraA02t05559Z Brassica rapa
BraA03t10304Z Brassica rapa
BraA06t25383Z Brassica rapa
BraSC103t45446Z Brassica rapa
BraSC138t45554Z Brassica rapa
BraSC143t45636Z Brassica rapa
BraSC58t46440Z Brassica rapa
BraSC58t46501Z Brassica rapa
BraSC59t46571Z Brassica rapa
C03p11490 Brassica napus
CANSAT11G0814 Cannabis sativa
CARHR192640 Cardamine hirsuta
Carub.0006s1858 Capsella rubella
CBR_g19308 Chara braunii
Cc06_g08400 Coffea canephora
CDE04G2910 Ceratophyllum demersum
CDE10G0227 Ceratophyllum demersum
CDE10G0631 Ceratophyllum demersum
Cfa003386 Carpinus fangiana
Ciclev10010005m.g Citrus clementina
Ciclev10010320m.g Citrus clementina
CiPaw.03G244900 Carya illinoinensis
ClCG06G011210 Citrullus lanatus
COL.COLO4_35113 Corchorus olitorius
Cpa.g.sc46.7 Carica papaya
Cre09.g388150 Chlamydomonas reinhardtii
CsaV3_1G030220 Cucumis sativus L.
DCAR_014887 Daucus carota
DCAR_020918 Daucus carota
DCAR_032519 Daucus carota
Dinv36517 Davidia involucrata
Dinv41504 Davidia involucrata
Duzib168G0900 Durio zibethinus
Duzib187G1708 Durio zibethinus
ECA246G0448 Erigeron canadensis
EL10Ac8g18671 Beta vulgaris
Eucgr.C01196 Eucalyptus grandis
Eucgr.C01530 Eucalyptus grandis
FAN19G1630 Fragaria x ananassa
FAN23G1698 Fragaria x ananassa
FAN26G1318 Fragaria x ananassa
FvH4_1g03150 Fragaria vesca
Glyma.13G166400 Glycine max
Glyma.17G114100 Glycine max
Gohir.A06G055500 Gossypium hirsutum
Gohir.D06G054400 Gossypium hirsutum
Gorai.009G350300 Gossypium raimondii
Gorai.010G063500 Gossypium raimondii
GSVIVG01015545001 Vitis vinifera
HanXRQChr06g0182851 Helianthus annuus
Haze_25566 Corylus avellana
Hma1.2p1_0018F.1_g012330 Hydrangea macrophylla
Hma1.2p1_0931F.1_g238060 Hydrangea macrophylla
Hund09250 Selenicereus undatus
Hund26509 Selenicereus undatus
Lalb_Chr07g0179001 Lupinus albus
Lalb_Chr12g0197971 Lupinus albus
Lj4g0001981 Lotus japonicus
Lj4g0022056 Lotus japonicus
Lsat_1_v5_gn_5_31321 Lactuca sativa
Manes.14G133000 Manihot esculenta
Mapoly0008s0076 Marchantia polymorpha
MBI01_g15682_MAGBIO Magnolia biondii
MBI01_g45309_MAGBIO Magnolia biondii
MD02G1030500 Malus domestica
MD05G1026100 Malus domestica
MD15G1172100 Malus domestica
Medtr4g114610 Medicago truncatula
MELO3C010337.2 Cucumis melo
Migut.H01282 Erythranthe guttata
MSTRG.12252 Avicennia marina
Nitab4.5_0000028g0370 Nicotiana tabacum
Nitab4.5_0006661g0010 Nicotiana tabacum
Nn2g12039 Nelumbo nucifera
Nn2g12046 Nelumbo nucifera
Oeu044201.1 Olea europaea
Os03g0811800 Oryza sativa ssp. japonica
Peaxi162Scf00046g00622 Petunia axillaris
PGR102G2059 Punica granatum
PGR111G0044 Punica granatum
PGSC0003DMG400019893 Solanum tuberosum
Phvul.003G165300 Phaseolus vulgaris
Potri.006G069000 Populus trichocarpa
Potri.018G131000 Populus trichocarpa
Pp3c15_5230 Physcomitrium patens
PRCOL_00005826 Prasinoderma coloniale
Prupe.7G066500 Prunus persica
Prupe.7G244000 Prunus persica
Psat4g038680 Pisum sativum
PSO548G0025 Papaver somniferum
QL02p088661 Quercus lobata
RcHm_v2.0_Chr2g0088271 Rosa chinensis
Rhsim01G0068900 Rhododendron simsii
Rhsim03G0248400 Rhododendron simsii
SalBow6G5031 Salvia bowleyana
Sc08g0006540 Simmondsia chinensis
Sc18g0000550 Simmondsia chinensis
Sed0012264 Sechium edule
SGA_v2.0_scaffold109G31056 Striga asiatica
SGA_v2.0_scaffold3596G54365 Striga asiatica
SGA_v2.0_scaffold49G18402 Striga asiatica
SGA_v2.0_scaffold80G25793 Striga asiatica
SMO116G0310 Selaginella moellendorffii
SMO197G0073 Selaginella moellendorffii
Solyc07g008270.3 Solanum lycopersicum
Sopen07g004160 Solanum pennellii
Sp6g24220 Schrenkiella parvula
THA.LOC104799642 Tarenaya hassleriana
Thecc.09G127500 Theobroma cacao
Thhalv10015097m.g Eutrema salsugineum
TPR.G26498 Trifolium pratense
TWI34G1084 Tripterygium wilfordii
unitig_748.g8609 Utricularia gibba
vmacro20565 Vaccinium macrocarpon
VMungo1215G0455 Vigna mungo
Zm00001eb212180 Zea mays

User provided reference genes

Program Settings